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BaseInfo

ncRNA ID novel_osa_miR827
Species Oryza sativa
Class miRNA
Genome position Chr1:22374303-22374360 [-]
Reference genome IRGSP-1.0
Source SRR1742991
Length 24
Mature sequence(if miRNA) 35 - ACGGCCGUUCCUGUAGCAGGCACG - 58
Stem-loop(if miRNA) --      -   C           A  -  
  ACGGCC GUU CUGUAGCAGGC CG GCC
  |||||| ||| ||||||||||| || ||C
  UGCCGG CAA GACAUCGUCCG GC CGG
CG      G   U           -  A  
Stem-loop sequence ACGGCCGUUCCUGUAGCAGGCACGGCCCGGCACGGCCUGCUACAGUAACGGGCCGUGC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
AK288261.1
ncRNA:24   GCACGGACGAUGUCCUUGCCGGCA   1
  *|**||||||=||||||||||||*
targets:5476   AGAUCCUGCUGCAGGAACGGCCGC   5499

2.0 Oryza sativa Japonica Group cDNA, clone: J090015P07, full insert sequence NA coding protein psRNATarget