Search result

BaseInfo

ncRNA ID	novel_osa_miR815
Species	Oryza sativa
Class	miRNA
Genome position	Chr11:14083939-14083987 [-]
Reference genome	IRGSP-1.0
Source	SRR1742990
Length	24
Mature sequence(if miRNA)	26 - AGUAGUAAUUAAUAACUUAGGCCU - 49
Stem-loop(if miRNA)	AGUA      AA          C     GUAAUU  UAACUUAGGC U     ||||||  |||||||||| G     UAUUAG  AUUGGAUCUG G UUUC      AG          U
Stem-loop sequence	AGUAGUAAUUAAUAACUUAGGCCUGGUGUCUAGGUUAGAGAUUAUCUUU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
AK289124.1	ncRNA:24   UCCGGAUUCAAUAAUUAAUGAUGA   1   |*|||||||||||||||||||||| targets:1978   ACGCCUAAGUUAUUAAUUACUACU   2001 Target Full Sequence	0.0	Oryza sativa Japonica Group cDNA, clone: J090097O15, full insert sequence	NA	coding protein	psRNATarget
AK102955.1	ncRNA:24   UCCGGAUUCAAUAAUUAAUGAUGA   1   |**=|||||||||||||||||||| targets:2432   ACAUCUAAGUUAUUAAUUACUACU   2455 Target Full Sequence	0.0	Oryza sativa Japonica Group cDNA clone:J033115G04, full insert sequence	NA	coding protein	psRNATarget
AK107014.1	ncRNA:24   UCCGGAUUCAAUAAUUAAUGAUGA   1   |*|=|||||*|||||||||||||| targets:765   ACGUCUAAGGUAUUAAUUACUACU   788 Target Full Sequence	1.0	Oryza sativa Japonica Group cDNA clone:002-120-F11, full insert sequence	NA	coding protein	psRNATarget
AK288798.1	ncRNA:24   UCCG-GAUUCAAUAAUUAAUGAUGA   1   **||-||||*|*||||||||||||| targets:164   CAGCACUAAUUAAUUAAUUACUACU   188 Target Full Sequence	2.0	Oryza sativa Japonica Group cDNA, clone: J090070H05, full insert sequence	NA	coding protein	psRNATarget