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BaseInfo

ncRNA ID novel_osa_miR814
Species Oryza sativa
Class miRNA
Genome position Chr11:14922041-14922118 [-]
Reference genome IRGSP-1.0
Source SRR1742990;SRR1742994;SRR3123650;SRR1738209;SRR1738211;SRR1738216;SRR1738217;SRR1738219;SRR1738221;SRR1738223;SRR1738239
Length 24
Mature sequence(if miRNA) 55 - ACGAAUCCGGGACUAAAGAUAGCU - 78
Stem-loop(if miRNA) --     U              --AG  --        GUG
  ACGAA CCGGGACUAAAGAU    CU  AGUCCCGG   A
  ||||| ||||||||||||||    ||  ||||||||   A
  UGCUU GGCCCUGAUUUCUA    GA  UCAGGGCC   A
UG     -              ACUA  AA        AAU
Stem-loop sequence ACGAAUCCGGGACUAAAGAUAGCUAGUCCCGGGUGAAAUAACCGGGACUAAAGAUCAAUCUUUAGUCCCGGUUCGUGU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
AK288438.1
ncRNA:24   UCGAUAGAAAUCAGGGCCUAAGCA   1
  ||*|||=|||||||||||||||||
targets:2444   AGGUAUUUUUAGUCCCGGAUUCGU   2467

1.0 Oryza sativa Japonica Group cDNA, clone: J090034C21, full insert sequence NA coding protein psRNATarget
AK288463.1
ncRNA:24   UCGAUAGAAAUCAGGGCCUAAGCA   1
  =*||||||||||||||||||||*|
targets:681   GCCUAUCUUUAGUCCCGGAUUCCU   704

1.5 Oryza sativa Japonica Group cDNA, clone: J090036E20, full insert sequence NA coding protein psRNATarget
AK288799.1
ncRNA:24   UCGAUAGAAAUCAGGGCCUAAGCA   1
  *||-||||||||||||||||||*|
targets:331   CGC-AUCUUUAGUCCCGGAUUCAU   353

1.5 Oryza sativa Japonica Group cDNA, clone: J090070K11, full insert sequence NA coding protein psRNATarget