ncRNA ID | novel_osa_miR814 |
Species | Oryza sativa |
Class | miRNA |
Genome position | Chr11:14922041-14922118 [-] |
Reference genome | IRGSP-1.0 |
Source | SRR1742990;SRR1742994;SRR3123650;SRR1738209;SRR1738211;SRR1738216;SRR1738217;SRR1738219;SRR1738221;SRR1738223;SRR1738239 |
Length | 24 |
Mature sequence(if miRNA) | 55 - ACGAAUCCGGGACUAAAGAUAGCU - 78 |
Stem-loop(if miRNA) |
--     U              --AG  --        GUG   ACGAA CCGGGACUAAAGAU    CU  AGUCCCGG   A   ||||| ||||||||||||||    ||  ||||||||   A   UGCUU GGCCCUGAUUUCUA    GA  UCAGGGCC   A UG     -              ACUA  AA        AAU |
Stem-loop sequence | ACGAAUCCGGGACUAAAGAUAGCUAGUCCCGGGUGAAAUAACCGGGACUAAAGAUCAAUCUUUAGUCCCGGUUCGUGU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
AK288438.1 |
|
1.0 | Oryza sativa Japonica Group cDNA, clone: J090034C21, full insert sequence | NA | coding protein | psRNATarget | |||||||||
AK288463.1 |
|
1.5 | Oryza sativa Japonica Group cDNA, clone: J090036E20, full insert sequence | NA | coding protein | psRNATarget | |||||||||
AK288799.1 |
|
1.5 | Oryza sativa Japonica Group cDNA, clone: J090070K11, full insert sequence | NA | coding protein | psRNATarget |