ncRNA ID | novel_osa_miR813 |
Species | Oryza sativa |
Class | miRNA |
Genome position | Chr11:508827-508926 [+] |
Reference genome | IRGSP-1.0 |
Source | SRR1742990;SRR1742991;SRR1742996 |
Length | 24 |
Mature sequence(if miRNA) | 1 - CCCAGGCAAUUGUAUCGUCUACGU - 24 |
Stem-loop(if miRNA) |
--C        UU    C     C     C  C      -----------         CCAGGCAA  GUAU GUCUA GUCGG GU GUUCAA           UGCUGC    ||||||||  |||| ||||| ||||| || ||||||           |||||A    GGUCCGUU  UAUA CAGGU UAGUC CG UAGGUU           AUGACU AUC        UG    A     U     U  U      CUCCAGCUUAC      |
Stem-loop sequence | CCCAGGCAAUUGUAUCGUCUACGUCGGCGUCGUUCAAUGCUGCAUCAGUACAUUCGACCUCUUGGAUUGCUCUGAUUUGGACAAUAUGUUUGCCUGGCUA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
AK288885.1 |
|
2.0 | Oryza sativa Japonica Group cDNA, clone: J090079K20, full insert sequence | NA | coding protein | psRNATarget | |||||||||
AK289121.1 |
|
2.5 | Oryza sativa Japonica Group cDNA, clone: J090097J21, full insert sequence | NA | coding protein | psRNATarget |