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BaseInfo

ncRNA ID	novel_osa_miR796
Species	Oryza sativa
Class	miRNA
Genome position	Chr11:2191262-2191466 [+]
Reference genome	IRGSP-1.0
Source	SRR1742990;SRR1849776;SRR2040395;SRR2040403;SRR2857734;SRR2857735;SRR1738222
Length	24
Mature sequence(if miRNA)	1 - AACGUAGAUUACUGACAAAACUCA - 24
Stem-loop(if miRNA)	--AAC                   C   C              ----      A              C  G          C       UUCUAC    AU   ACA      GUAGAUUACUGACAAAACU AUU CAUAACCCCUAGGU    UAUUUU CGAGACGAAUCUAA GA GUAUAUUAAU UAUGAUU      AGUG  GCU   G      ||||||||||||||||||| ||| ||||||||||||||    |||||| |||||||||||||| || |||||||||| |||||||      ||||  |||   U      CAUCUAAUGACUGUUUUGG UAA GUAUUGGGGAUCCG    AUAAAA GCUCUGCUUAGAUU CU CAUAUAAUUA AUAUUAA      UCAC  CGA   A AUUUA                   C   A              GUCG      C              A  A          A       ------    --   CUA
Stem-loop sequence	AACGUAGAUUACUGACAAAACUCAUUCCAUAACCCCUAGGUUAUUUUACGAGACGAAUCUAACGAGGUAUAUUAAUCUAUGAUUUUCUACAGUGAUGCUACAGUAAUCAGCCACUAAUUAUAAAUUAAUAUACAUCAUUAGAUUCGUCUCGCAAAAUAGCUGGCCUAGGGGUUAUGAAAUCGGUUUUGUCAGUAAUCUACAUUUA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_015762321.1	ncRNA:24   ACUCAAAACAGUCAUUAGAUGCAA   1   |||*||||*||||||||||||||| targets:1109   UGAAUUUUAUCAGUAAUCUACGUU   1132 Target Full Sequence	1.0	PREDICTED: Oryza sativa Japonica Group transcription initiation factor TFIID subunit 13 (LOC9268703), mRNA	transcription initiation factor TFIID subunit 13(LOC9268703)	coding protein	psRNATarget
AK240978.1	ncRNA:24   ACUCAAAACAGUCAUUAGAUGCAA   1   |*||||||||*|||||||||=||| targets:540   UUAGUUUUGUAAGUAAUCUAUGUU   563 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA, clone: J065048J02, full insert sequence	NA	coding protein	psRNATarget
XM_015781418.1	ncRNA:24   ACUCAAAACAGUCAUUAGAUGCAA   1   |*=|||||*|||||||||||=||| targets:1305   UAGGUUUUAUCAGUAAUCUAUGUU   1328 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group serine/arginine repetitive matrix protein 1 (LOC4335446), mRNA	serine/arginine repetitive matrix protein 1(LOC4335446)	coding protein	psRNATarget
AK107263.1	ncRNA:24   ACUCAAAACAGUCAUUAGAUGCAA   1   |*=|||||*|||||||||||=||| targets:1216   UAGGUUUUAUCAGUAAUCUAUGUU   1239 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA clone:002-125-H03, full insert sequence	NA	coding protein	psRNATarget
XM_015766387.1	ncRNA:24   ACUCAAAACAGUCAUUAGAUGCAA   1   |**|||||||=|*||||||||||| targets:21   UUUGUUUUGUUAUUAAUCUACGUU   44 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4325753 (LOC4325753), mRNA	uncharacterized LOC4325753(LOC4325753)	coding protein	psRNATarget