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BaseInfo

ncRNA ID novel_osa_miR788
Species Oryza sativa
Class miRNA
Genome position Chr3:22068494-22068543 [-]
Reference genome IRGSP-1.0
Source SRR1742990;SRR1742991;SRR2040390;SRR2040391;SRR3123630;SRR3234040;SRR3234041;SRR3234042;SRR3234043;SRR3234044;SRR5049779;SRR5049782;SRR5049787;SRR1738209;SRR1738214;SRR1738224;SRR1738225
Length 19
Mature sequence(if miRNA) 32 - UUCCCCAGUGGAGUCGCCA - 50
Stem-loop(if miRNA) -UUCCC  -GU           AAA
      CA   GGAGUCGCCAA   U
      ||   |||||||||||
      GU   UUUCAGCGGUU   C
UGAACA  GUU           GUG
Stem-loop sequence UUCCCCAGUGGAGUCGCCAAAAAUCGUGUUGGCGACUUUUUGUGACAAGU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_015786830.1
ncRNA:19   ACCGCUGAGGUGACCCCUU   1
  ||||||||||=||||||||
targets:348   UGGCGACUCCGCUGGGGAA   366

1.5 PREDICTED: Oryza sativa Japonica Group uncharacterized LOC107281275 (LOC107281275), mRNA uncharacterized LOC107281275(LOC107281275) coding protein psRNATarget