ncRNA ID | novel_osa_miR788 |
Species | Oryza sativa |
Class | miRNA |
Genome position | Chr3:22068494-22068543 [-] |
Reference genome | IRGSP-1.0 |
Source | SRR1742990;SRR1742991;SRR2040390;SRR2040391;SRR3123630;SRR3234040;SRR3234041;SRR3234042;SRR3234043;SRR3234044;SRR5049779;SRR5049782;SRR5049787;SRR1738209;SRR1738214;SRR1738224;SRR1738225 |
Length | 19 |
Mature sequence(if miRNA) | 32 - UUCCCCAGUGGAGUCGCCA - 50 |
Stem-loop(if miRNA) |
-UUCCC  -GU           AAA       CA   GGAGUCGCCAA   U       ||   |||||||||||       GU   UUUCAGCGGUU   C UGAACA  GUU           GUG |
Stem-loop sequence | UUCCCCAGUGGAGUCGCCAAAAAUCGUGUUGGCGACUUUUUGUGACAAGU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_015786830.1 |
|
1.5 | PREDICTED: Oryza sativa Japonica Group uncharacterized LOC107281275 (LOC107281275), mRNA | uncharacterized LOC107281275(LOC107281275) | coding protein | psRNATarget |