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BaseInfo

ncRNA ID	novel_osa_miR787
Species	Oryza sativa
Class	miRNA
Genome position	Chr3:31748767-31748882 [+]
Reference genome	IRGSP-1.0
Source	SRR1742990
Length	24
Mature sequence(if miRNA)	93 - GUGCAAUGCUAGAAAGUCUUACAU - 116
Stem-loop(if miRNA)	--       A            CC     --   A           A   AUAAACACAU   GUAAGAC UUCUAGCAUUGC  ACAUA  CAU UAGAUGUUAAU AAU          A   ||||||| ||||||||||||  |||||  ||| ||||||||||| |||   CAUUCUG AAGAUCGUAACG  UGUAU  GUA AUCUACAAUUA UUA          C UA       A            --     AA   A           C   GAUCUAUAUA
Stem-loop sequence	GUAAGACAUUCUAGCAUUGCCCACAUACAUAUAGAUGUUAAUAAAUAUAAACACAUACAUAUAUCUAGAUUCAUUAACAUCUAAAUGAAUAUGUGCAAUGCUAGAAAGUCUUACAU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
AK072999.1	ncRNA:24   UACAUUCUGAAAGAUCGUAACGUG   1   ||||||||||||||||||||||*| targets:1528   AUGUAAGACUUUCUAGCAUUGCUC   1551 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA clone:J023149N01, full insert sequence	NA	coding protein	psRNATarget
CT836048.1	ncRNA:24   UACAUUCUGAAAGAUCGUAACGUG   1   ||||||||||||||||||||||*= targets:441   AUGUAAGACUUUCUAGCAUUGCCU   464 Target Full Sequence	2.5	Oryza sativa (indica cultivar-group) cDNA clone:OSIGCEA023O09, full insert sequence	NA	coding protein	psRNATarget
AK070825.1	ncRNA:24   UACAUUCUGAAAGAUCGUAACGUG   1   ||||||||||||||||||||||** targets:1514   AUGUAAGACUUUCUAGCAUUGCUA   1537 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA clone:J023064P05, full insert sequence	NA	coding protein	psRNATarget
XM_015784092.1	ncRNA:24   UACAUUCUGAAAGAUCGUAACGUG   1   ||||||||||||||||||||||** targets:1684   AUGUAAGACUUUCUAGCAUUGCUA   1707 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group serine carboxypeptidase-like 50 (LOC4339736), mRNA	serine carboxypeptidase-like 50(LOC4339736)	coding protein	psRNATarget
AK318573.1	ncRNA:24   UACAUUCUGAAAGAUCGUAACGUG   1   ||||||||||||||||||||||*= targets:302   AUGUAAGACUUUCUAGCAUUGCUU   325 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA, clone: J090044A16, full insert sequence	NA	coding protein	psRNATarget
CT831361.1	ncRNA:24   UACAUUCUGAAAGAUCGUAACGUG   1   ||*|||||||||||||||||||*| targets:1953   AUAUAAGACUUUCUAGCAUUGCUC   1976 Target Full Sequence	1.5	Oryza sativa (indica cultivar-group) cDNA clone:OSIGCPI207J06, full insert sequence	NA	coding protein	psRNATarget
AK072517.1	ncRNA:24   UACAUUCUGAAAGAUCGUAACGUG   1   |||*||||||||||||||||||*| targets:1318   AUGCAAGACUUUCUAGCAUUGCCC   1341 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA clone:J023133J02, full insert sequence	NA	coding protein	psRNATarget
AK288796.1	ncRNA:24   UACAUUCUGAAAGAUCGUAACGUG   1   *|*|||||||||||||||||||*| targets:758   UUAUAAGACUUUCUAGCAUUGCCC   781 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA, clone: J090070F05, full insert sequence	NA	coding protein	psRNATarget
XM_015766541.1	ncRNA:24   UACAUUCUGAAAGAUCGUAACGUG   1   *|*|||||||||||||||||*||= targets:2394   UUAUAAGACUUUCUAGCAUUACAU   2417 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group multicopper oxidase LPR1 (LOC4326011), transcript variant X1, mRNA	multicopper oxidase LPR1(LOC4326011)	coding protein	psRNATarget
AK108630.1	ncRNA:24   UACAUUCUGAAAGAUCGUAACGUG   1   ||**||||||||||||||||||*| targets:1590   AUACAAGACUUUCUAGCAUUGCUC   1613 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA clone:002-147-F01, full insert sequence	NA	coding protein	psRNATarget
XM_015763482.1	ncRNA:24   UACAUUCUGAAAGAUCGUAACGUG   1   ||**||||||||||||||||||*| targets:1624   AUACAAGACUUUCUAGCAUUGCUC   1647 Target Full Sequence	1.5	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4352431 (LOC4352431), mRNA	uncharacterized LOC4352431(LOC4352431)	coding protein	psRNATarget