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BaseInfo

ncRNA ID	novel_osa_miR786
Species	Oryza sativa
Class	miRNA
Genome position	Chr3:29108900-29108955 [+]
Reference genome	IRGSP-1.0
Source	SRR1742990
Length	24
Mature sequence(if miRNA)	33 - GAGCCCACAUGUCAGUGACAAAGU - 56
Stem-loop(if miRNA)	--                C   CUA  G   UUUGUCACUGAUAUGU GGC   GG A   |||||||||||||||| |||   || U   AAACAGUGACUGUACA CCG   CU C UG                C   -AG  A
Stem-loop sequence	UUUGUCACUGAUAUGUCGGCCUAGGGAUCAUCGAGCCCACAUGUCAGUGACAAAGU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_015761343.1	ncRNA:24   UGAAACAGUGACUGUACACCCGAG   1   *=||||||||||||||||||||*| targets:50   CUUUUGUCACUGACAUGUGGGCCC   73 Target Full Sequence	1.5	PREDICTED: Oryza sativa Japonica Group biogenesis of lysosome-related organelles complex 1 subunit 1 (LOC4349586), mRNA	biogenesis of lysosome-related organelles complex 1 subunit 1(LOC4349586)	coding protein	psRNATarget
AK109153.1	ncRNA:24   UGAAACAGUGACUGUACACCCGAG   1   *||||||||=|*|||||||||||| targets:1307   CCUUUGUCAUUAACAUGUGGGCUC   1330 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA clone:002-155-F12, full insert sequence	NA	coding protein	psRNATarget
CT831335.1	ncRNA:24   UGAAACAGUGACUGUACACCCGAG   1   *||||||||=|*|||||||||||| targets:1361   CCUUUGUCAUUAACAUGUGGGCUC   1384 Target Full Sequence	2.5	Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSA015D18, full insert sequence	NA	coding protein	psRNATarget
XM_015783779.1	ncRNA:24   UGAAACAGUGACUGUACACCCGAG   1   *||||||||=|*|||||||||||| targets:1529   CCUUUGUCAUUAACAUGUGGGCUC   1552 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4339114 (LOC4339114), transcript variant X2, mRNA	uncharacterized LOC4339114(LOC4339114)	coding protein	psRNATarget
XM_015783778.1	ncRNA:24   UGAAACAGUGACUGUACACCCGAG   1   *||||||||=|*|||||||||||| targets:1621   CCUUUGUCAUUAACAUGUGGGCUC   1644 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4339114 (LOC4339114), transcript variant X1, mRNA	uncharacterized LOC4339114(LOC4339114)	coding protein	psRNATarget
XM_015790399.1	ncRNA:24   UGAAAC-AGUGACUGUACACCCGAG   1   |||--|-|||||||||||||||||| targets:585   ACU--GCUCACUGACAUGUGGGCUC   607 Target Full Sequence	2.0	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC107278003 (LOC107278003), mRNA	uncharacterized LOC107278003(LOC107278003)	coding protein	psRNATarget
XM_015783407.1	ncRNA:24   UGAAACAGUGACUGUACACCCGAG   1   ||*|*|||||||||||||||||*= targets:1532   ACAUGGUCACUGACAUGUGGGCCU   1555 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group probable purine permease 4 (LOC4339571), mRNA	probable purine permease 4(LOC4339571)	coding protein	psRNATarget
AK100802.1	ncRNA:24   UGAAACAGUGACUGUACACCCGAG   1   **|**||||||||||||||||=|| targets:2047   CAUGGGUCACUGACAUGUGGGUUC   2070 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA clone:J023121K14, full insert sequence	NA	coding protein	psRNATarget
XM_015760038.1	ncRNA:24   UGAAACAGUGACUGUACACCCGAG   1   **|**||||||||||||||||=|| targets:2164   CAUGGGUCACUGACAUGUGGGUUC   2187 Target Full Sequence	1.5	PREDICTED: Oryza sativa Japonica Group protein NRT1/ PTR FAMILY 4.4 (LOC4350145), mRNA	protein NRT1/ PTR FAMILY 4.4(LOC4350145)	coding protein	psRNATarget
XM_015782273.1	ncRNA:24   UGAAACAGUGACUGUACACCCGAG   1   ||---|||||||||||||||||*| targets:86   AC---GUCACUGACAUGUGGGCCC   106 Target Full Sequence	1.5	PREDICTED: Oryza sativa Japonica Group L-type lectin-domain containing receptor kinase VIII.2 (LOC4337673), mRNA	L-type lectin-domain containing receptor kinase VIII.2(LOC4337673)	coding protein	psRNATarget
XM_015789739.1	ncRNA:24   UGAAACAGUGACUGUACACCCGAG   1   ==***|||||||||||||||||*| targets:50   GUGGGGUCACUGACAUGUGGGCCC   73 Target Full Sequence	1.5	PREDICTED: Oryza sativa Japonica Group multifunctional methyltransferase subunit TRM112-like protein At1g22270 (LOC4343952), mRNA	multifunctional methyltransferase subunit TRM112-like protein At1g22270(LOC4343952)	coding protein	psRNATarget
XM_015789994.1	ncRNA:24   UGAAACAGUGACUGUACACCCGAG   1   **|**|||||||||||||||||** targets:1111   CGUCAGUCACUGACAUGUGGGCCA   1134 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group cytosolic sulfotransferase 12 (LOC4343853), mRNA	cytosolic sulfotransferase 12(LOC4343853)	coding protein	psRNATarget
AK105239.1	ncRNA:24   UGAAACAGUGACUGUACACCCGAG   1   **|**|||||||||||||||||** targets:1124   CGUCAGUCACUGACAUGUGGGCCA   1147 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA clone:001-113-B04, full insert sequence	NA	coding protein	psRNATarget