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BaseInfo

ncRNA ID novel_osa_miR784
Species Oryza sativa
Class miRNA
Genome position Chr3:19738896-19738972 [+]
Reference genome IRGSP-1.0
Source SRR1742990
Length 24
Mature sequence(if miRNA) 1 - GGCGGGACUUGGCACUUGACGCGG - 24
Stem-loop(if miRNA) --        -    C     A G GG     --C    G
  GGCGGGAC UUGG ACUUG C C  GGCUG   AUCG U
  |||||||| |||| ||||| | |  |||||   |||| G
  CCGCCUUG AACC UGAAU G G  UCGGC   UAGC U
GG        U    -     G G AA     CUC    U
Stem-loop sequence GGCGGGACUUGGCACUUGACGCGGGGCUGCAUCGGUGUUCGAUCUCCGGCUAAGGGGUAAGUCCAAUGUUCCGCCGG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
AK288795.1
ncRNA:24   GGCGCAGUUCACGGUUCAGGGCGG   1
  ||||||||=|||||||||||||||
targets:3730   CCGCGUCAGGUGCCAAGUCCCGCC   3753

1.0 Oryza sativa Japonica Group cDNA, clone: J090070D09, full insert sequence NA coding protein psRNATarget