| ncRNA ID | ath-miR5645b |
| Species | Arabidopsis thaliana |
| Class | miRNA |
| Genome position | chr4:4889421-4889914 [+] |
| Reference genome | TAIR10 |
| Source | miRBase |
| Length | 20 |
| Mature sequence(if miRNA) | 67 - AUUUGAGUCAUGUCGUUAAG - 86 |
| Stem-loop(if miRNA) |
C CG UAAAAAA AGAC C CUCC C A A CUC UGUCUGUUGAAACAAAUUUAAACCCUAAAUCCUCAAAUCGAUUUCAUUAUUUAUGAUUUUGAGGCCAAGGUGGGU GACAAAUAAAUCGUAAA UUUUGUUGACUUUUGAAAUAAAUGACAAAGUUUUUGUUGACUUGUCAUUUGAGUCAUGUCGUUAAGUAGGUUAACA UUUA GUUAAUGUCU GUUUAU UC GU A AACAAAACAACGUUGUUUAUUGAAG GUUU C ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||| |||||| || || | ||||||||||||||||||||||||| |||| CUGUUUAUUUAGCAUUU AAAACAACUGAAAGCUUUGUUUACUGUUUCAAAAACAACUGAACGGUAAACUCAGUAUAGCAAUUUAUCCAAUUGU AAAU CAAUUACAGA CAAAUA AG CA U UUGUUUUGUUGCAACAAAUAACUUC CUGU U U CA CUUAAAA GCCA A AACU A A C --U UUUGCUGCAGCAAAACAGAGAACUUUGUUUAUAUUUGGAAUUUAGAGGUUUAGCUAUAGUAAUAGAGUUUUAGUG |
| Stem-loop sequence | CGACAAAUAAAUCGUAAACGUUUUGUUGACUUUUGAAAUAAAUGACAAAGUUUUUGUUGACUUGUCAUUUGAGUCAUGUCGUUAAGUAGGUUAACAUAAAAAAUUUAAGACGUUAAUGUCUCGUUUAUCUCCUCCGUAAAAACAAAACAACGUUGUUUAUUGAAGCUCGUUUUGUCUGUUGAAACAAAUUUAAACCCUAAAUCCUCAAAUCGAUUUCAUUAUUUAUGAUUUUGAGGCCAAGGUGGGUCUGUGAUUUUGAGAUAAUGAUAUCGAUUUGGAGAUUUAAGGUUUAUAUUUGUUUCAAGAGACAAAACGACGUCGUUUUGUCUCUUCAAUAAACAACGUUGUUUUGUUCUAACAGAUCAAAUAAACAAGACAUUAACACCGUAAAAAAAUUCUGUUAACCUAUUUAACGAUAUGACUCAAAUGGCAAGUCAACAAAAACUUUGUCAUUUGUUUCGAAAGUCAACAAAAACUUUACGAUUUAUUUGUCU |
| 1 | PMID:21940835
"High-resolution experimental and computational profiling of tissue-specific known and novel miRNAs in Arabidopsis"; Breakfield NW, Corcoran DL, Petricka JJ, Shen J, Sae-Seaw J, Rubio-Somoza I, Weigel D, Ohler U, Benfey PN; Genome Res. 22:163-176(2012). |