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BaseInfo

ncRNA ID novel_osa_miR737
Species Oryza sativa
Class miRNA
Genome position Chr4:10822285-10822337 [-]
Reference genome IRGSP-1.0
Source SRR1742989;SRR1742990;SRR1742992;SRR1742994;SRR5049792;SRR5049793
Length 24
Mature sequence(if miRNA) 30 - AAGAUAAAUGAUACGUCAUCGGCG - 53
Stem-loop(if miRNA) --AAG          C   -      G
     AUAAAUGAUA GUC AUCGGC A
     |||||||||| ||| |||||| C
     UAUUUGCUAU CGG UAGCCG U
UUAGA          -   C      G
Stem-loop sequence AAGAUAAAUGAUACGUCAUCGGCGACUGGCCGAUCGGCUAUCGUUUAUAGAUU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
AK121353.1
ncRNA:24   GCGGCUACUGCAUAGUAAAUAGAA   1
  =|||||||||*|||||||||||||
targets:942   UGCCGAUGACAUAUCAUUUAUCUU   965

1.0 Oryza sativa Japonica Group cDNA clone:J023122B16, full insert sequence NA coding protein psRNATarget
AK288616.1
ncRNA:24   GCGGCUACUGCAUAGUAAAUAGAA   1
  =|||||||||*|||||||||*|||
targets:1904   UGCCGAUGACAUAUCAUUUACCUU   1927

2.5 Oryza sativa Japonica Group cDNA, clone: J090054A10, full insert sequence NA coding protein psRNATarget
XM_015757456.1
ncRNA:24   GCGGCUACUGCAUAGUAAAUAGAA   1
  =|||||||||*|*|||||||||||
targets:2477   UGCCGAUGACAUUUCAUUUAUCUU   2500

2.5 PREDICTED: Oryza sativa Japonica Group uncharacterized LOC9272034 (LOC9272034), transcript variant X2, mRNA uncharacterized LOC9272034(LOC9272034) coding protein psRNATarget