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BaseInfo

ncRNA ID novel_osa_miR727
Species Oryza sativa
Class miRNA
Genome position Chr2:4195647-4195777 [-]
Reference genome IRGSP-1.0
Source SRR1742989;SRR1743000;SRR1849773;SRR1849774;SRR1849781;SRR1849784;SRR2040385;SRR2040386;SRR2040388;SRR2040390;SRR2040392;SRR2040393;SRR2040394;SRR2040396;SRR2040397;SRR2040401;SRR2040402;SRR2040404;SRR2040405;SRR2040406;SRR2040408;SRR2040409;SRR2040411;SRR2857728;SRR2857731;SRR1738227
Length 26
Mature sequence(if miRNA) 106 - UGACCCGUGGAUACUCUUUUACCCAC - 131
Stem-loop(if miRNA) --U         A    CU  U      A         C           A      C    A A
   GACCCGUGG UACU  UU ACCCAC CUAGUUCAA UAAAUGAACUA AUUUCA UUUU G A
   ||||||||| ||||  || |||||| ||||||||| ||||||||||| |||||| |||| | U
   UUGGGUAUC AUGA  AA UGGGUG GAUCAGGUU AUUUGCUUGAU UAAAGU AAAA C C
CGG         C    UU  C      A         U           G      A    A A
Stem-loop sequence UGACCCGUGGAUACUCUUUUACCCACACUAGUUCAACUAAAUGAACUAAAUUUCACUUUUAGAAUCACAAAAAAUGAAAUGUAGUUCGUUUAUUUGGACUAGAGUGGGUCAAUUAGUACCUAUGGGUUGGC