ncRNA ID | novel_osa_miR726 |
Species | Oryza sativa |
Class | miRNA |
Genome position | Chr5:9245012-9245110 [+] |
Reference genome | IRGSP-1.0 |
Source | SRR1555746;SRR1556014 |
Length | 22 |
Mature sequence(if miRNA) | 78 - CGGAUCUGGGAGGGGAGGCCGG - 99 |
Stem-loop(if miRNA) |
--         --    --    AUC        G         AACC   UC   GGCCUCCCU  CCGG  CCGG   UUGGAGGG AGGCCGGGG    ACG  G   |||||||||  ||||  ||||   |||||||| |||||||||    |||  C   CCGGAGGGG  GGUC  GGCC   AGCCUCCC UCCGGCCCC    UGC  C GG         AG    UA    ---        -         CUCC   CG |
Stem-loop sequence | GGCCUCCCUCCGGCCGGAUCUUGGAGGGGAGGCCGGGGAACCACGUCGCCGCCGUCCUCCCCCGGCCUCCCUCCGACCGGAUCUGGGAGGGGAGGCCGG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_015785957.1 |
|
1.0 | PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4340614 (LOC4340614), mRNA | uncharacterized LOC4340614(LOC4340614) | coding protein | psRNATarget | |||||||||
AK106064.1 |
|
1.0 | Oryza sativa Japonica Group cDNA clone:001-206-G08, full insert sequence | NA | coding protein | psRNATarget | |||||||||
AK243667.1 |
|
2.0 | Oryza sativa Japonica Group cDNA, clone: J100089K01, full insert sequence | NA | coding protein | psRNATarget |