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BaseInfo

ncRNA ID novel_osa_miR720
Species Oryza sativa
Class miRNA
Genome position Chr1:42588641-42588690 [-]
Reference genome IRGSP-1.0
Source SRR1555746;SRR1556014;SRR4407958
Length 24
Mature sequence(if miRNA) 1 - CGAAUCGAGCCUAGGACGAGCCAA - 24
Stem-loop(if miRNA) --        -   A      G   A
  GGCUCGUU UGG GCUCGA UCG G
  |||||||| ||| |||||| |||
  CCGAGCAG AUC CGAGCU AGC C
AA        G   -      A   U
Stem-loop sequence GGCUCGUUUGGAGCUCGAGUCGAGCUCGAAUCGAGCCUAGGACGAGCCAA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_015773991.1
ncRNA:24   AACCGAGCAGGAUCCGAGCUAAGC   1
  |||||||||||||||||=||||||
targets:1821   UUGGCUCGUCCUAGGCUUGAUUCG   1844

1.5 PREDICTED: Oryza sativa Japonica Group serine/arginine repetitive matrix protein 1 (LOC4332074), mRNA serine/arginine repetitive matrix protein 1(LOC4332074) coding protein psRNATarget