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BaseInfo

ncRNA ID novel_osa_miR719
Species Oryza sativa
Class miRNA
Genome position Chr3:12804066-12804153 [+]
Reference genome IRGSP-1.0
Source SRR1298758;SRR2097779;SRR2098557;SRR1555751;SRR1556018;SRR1300837;SRR1654490
Length 24
Mature sequence(if miRNA) 65 - AUUAAUAUGAUUGUGGGAAAUGCU - 88
Stem-loop(if miRNA) --           U          A              - AUA
  CAUUUCUCAUA UCAUAUUGAU UUAAUGAAUCUAGA C   U
  ||||||||||| |||||||||| |||||||||||||| |   A
  GUAAAGGGUGU AGUAUAAUUA AGUUACUUAGAUUU G   U
UC           U          C              A CUA
Stem-loop sequence CAUUUCUCAUAUUCAUAUUGAUAUUAAUGAAUCUAGACAUAUAUAUCGAUUUAGAUUCAUUGACAUUAAUAUGAUUGUGGGAAAUGCU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
CT837594.1
ncRNA:24   UCGUAAAGGGUGUUAGUAUAAUUA   1
  |||||||||||||*||||||||||
targets:1295   AGCAUUUCCCACAUUCAUAUUAAU   1318

1.5 Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSN021M15, full insert sequence NA coding protein psRNATarget
AK288214.1
ncRNA:24   UCGUAAAGGGUGUUAGUAUAAUUA   1
  |||||||||||||*||||||||||
targets:2619   AGCAUUUCCCACAUUCAUAUUAAU   2642

1.5 Oryza sativa Japonica Group cDNA, clone: J090010G11, full insert sequence NA coding protein psRNATarget
XM_015773673.1
ncRNA:24   UCGUAAAGGGUGUUAGUAUAAUUA   1
  |||||||=|||||*||||||||||
targets:1776   AGCAUUUUCCACAUUCAUAUUAAU   1799

2.5 PREDICTED: Oryza sativa Japonica Group cytochrome P450 78A5 (LOC4333404), mRNA cytochrome P450 78A5(LOC4333404) coding protein psRNATarget
XM_015767758.1
ncRNA:24   UCGUAAAGGGUGUUAGUAUAAUUA   1
  ||=||||||||||*|||||||||*
targets:3758   AGUAUUUCCCACAUUCAUAUUAAC   3781

2.5 PREDICTED: Oryza sativa Japonica Group transcription factor bHLH68 (LOC4325885), transcript variant X3, mRNA transcription factor bHLH68(LOC4325885) coding protein psRNATarget