ncRNA ID | novel_osa_miR717 |
Species | Oryza sativa |
Class | miRNA |
Genome position | Chr1:7672610-7672683 [+] |
Reference genome | IRGSP-1.0 |
Source | SRR1742989 |
Length | 19 |
Mature sequence(if miRNA) | 56 - GUGACAUGUUGCUAGAGUA - 74 |
Stem-loop(if miRNA) |
--    U  U  C   UG UG     AUU   GC   GA   CUCU GU AC UGU  C  CCUGU   GCU  UGU  U   |||| || || |||  |  |||||   |||  |||   GAGA CG UG ACA  G  GGACG   CGA  ACA  G AU    U  U  U   GU --     ACU   --   AG |
Stem-loop sequence | CUCUUGUUACCUGUUGCUGCCUGUAUUGCUGCUGUGAUGGAACAAGCUCAGCAGGGUGACAUGUUGCUAGAGUA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
AK070057.1 |
|
3.0 | Oryza sativa Japonica Group cDNA clone:J023041K22, full insert sequence | NA | coding protein | psRNATarget |