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BaseInfo

ncRNA ID novel_osa_miR714
Species Oryza sativa
Class miRNA
Genome position Chr1:27905431-27905484 [-]
Reference genome IRGSP-1.0
Source SRR1742989;SRR1742990;SRR1738224
Length 25
Mature sequence(if miRNA) 30 - ACGUGCGCGCUCGCUCGCCUGGCCU - 54
Stem-loop(if miRNA) --A         U   U      G  U
   CGUGCGCGC CGC CGCCUG CC G
   ||||||||| ||| |||||| || G
   GCACGUGCG GCG GCGGAC GG C
GCA         C   -      G  A
Stem-loop sequence ACGUGCGCGCUCGCUCGCCUGGCCUGGCAGGGCAGGCGGCGCGCGUGCACGACG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
AK288593.1
ncRNA:25   UCCGGUCCGCUCGCUCGCGCGUGCA   1
  ||||*||||||||||||||||=|||
targets:904   AGGCGAGGCGAGCGAGCGCGCGCGU   928

1.5 Oryza sativa Japonica Group cDNA, clone: J090051B14, full insert sequence NA coding protein psRNATarget
XM_015785674.1
ncRNA:25   UCC--------GGUCCGCUCGCUCGCGCGUGCA   1
  |||--------||*|||||||||||||||=||*
targets:119   AGGAAUCGAUCCCCGGCGAGCGAGCGCGCGCGA   151

2.5 PREDICTED: Oryza sativa Japonica Group protein BZR1 homolog 3 (LOC4341270), mRNA protein BZR1 homolog 3(LOC4341270) coding protein psRNATarget
AK101229.1
ncRNA:25   UCC--------GGUCCGCUCGCUCGCGCGUGCA   1
  |||--------||*|||||||||||||||=||*
targets:101   AGGAAUCGAUCCCCGGCGAGCGAGCGCGCGCGA   133

2.5 Oryza sativa Japonica Group cDNA clone:J033031H19, full insert sequence NA coding protein psRNATarget