| ncRNA ID | novel_osa_miR709 |
| Species | Oryza sativa |
| Class | miRNA |
| Genome position | Chr5:3108776-3108968 [-] |
| Reference genome | IRGSP-1.0 |
| Source | SRR1555746;SRR1556011;SRR1556014 |
| Length | 24 |
| Mature sequence(if miRNA) | 170 - UGAACAAUUGGCAUCUGAGAUUAU - 193 |
| Stem-loop(if miRNA) |
-- AA - U UUGGUG UU ----- A ----- GG --A --- A AA C GA UGAAC UUG GCAUC GAGAUUA UUGAUAU G GAGAUU UUGGCG AAGU UUUUUGA GAU GAUCG UC ACCGG G U ||||| ||| ||||| ||||||| ||||||| | |||||| |||||| |||| ||||||| ||| ||||| || ||||| | ACUUG AAC CGUGG CUUUGAU GACUAUG U CUUUGA AAUCGC UUCA GGGAGCU CUA CUAGC AG UGGCC C C AA -- A U -UAAUU GG UUUGG A CUUAA AU AAG CAU C AC U AU |
| Stem-loop sequence | UGAACAAUUGGCAUCUGAGAUUAUUGGUGUUGAUAUUUGGAGAUUAUUGGCGAAGUGGUUUUUGAAGAUGAUCGAUCAAACCGGCGGAUCUACUCCGGUCAGACCGAUCUACAUCGAAUCGAGGGUAACUUAAUUCCGCUAAAAGUUUCGGUUUUGGGUAUCAGUUAAUUAGUUUCUGGUGCACAAGUUCAAA |
| Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AK288532.1 |
|
1.0 | Oryza sativa Japonica Group cDNA, clone: J090045D07, full insert sequence | NA | coding protein | psRNATarget | |||||||||
| AK288809.1 |
|
2.0 | Oryza sativa Japonica Group cDNA, clone: J090071N20, full insert sequence | NA | coding protein | psRNATarget | |||||||||
| XM_015779434.1 |
|
3.0 | PREDICTED: Oryza sativa Japonica Group receptor-like serine/threonine-protein kinase SD1-6 (LOC4337108), mRNA | receptor-like serine/threonine-protein kinase SD1-6(LOC4337108) | coding protein | psRNATarget |