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BaseInfo

ncRNA ID novel_osa_miR707
Species Oryza sativa
Class miRNA
Genome position Chr1:21623065-21623156 [+]
Reference genome IRGSP-1.0
Source SRR1742989
Length 23
Mature sequence(if miRNA) 1 - GACAUUCUCGGUGACAUUGAGUC - 23
Stem-loop(if miRNA) --                     -               A   ACA
  GACAUUCUCGGUGACAUUGAG UCACUGACAUGUGGG CCA   U
  ||||||||||||||||||||| ||||||||||||||| |||   G
  CUGUAAGAGCCACUGUAACUC AGUGACUGUACACCC GGU   U
CA                     U               A   CCG
Stem-loop sequence GACAUUCUCGGUGACAUUGAGUCACUGACAUGUGGGACCAACAUGUGCCUGGACCCACAUGUCAGUGAUCUCAAUGUCACCGAGAAUGUCAC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
AK289098.1
ncRNA:23   CUGAGUUACAGUGGCUCUUACAG   1
  |||||||||||||||||||||||
targets:1743   GACUCAAUGUCACCGAGAAUGUC   1765

0.0 Oryza sativa Japonica Group cDNA, clone: J090096E23, full insert sequence NA coding protein psRNATarget