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BaseInfo

ncRNA ID novel_osa_miR698
Species Oryza sativa
Class miRNA
Genome position Chr1:11598990-11599112 [-]
Reference genome IRGSP-1.0
Source SRR1742988
Length 24
Mature sequence(if miRNA) 100 - CCGUCACAGGUAACUAGUCAUCUG - 123
Stem-loop(if miRNA) --                                 A   CU  -     AUUUA        
  CCGUCACAGGUAACUAGUCAUCUGUGACGGGUU GGA  UA AACCC     AGGUGAGGU
  ||||||||||||||||||||||||||||||||| |||  || |||||     ||||||||A
  GGCAGUGUCCAUUGAUCAGUGGACACUGCCCAA CUU  AU UUGGG     UCCACUCCA
UG                                 -   UU  C     CAGUG        
Stem-loop sequence CCGUCACAGGUAACUAGUCAUCUGUGACGGGUUAGGACUUAAACCCAUUUAAGGUGAGGUAACCUCACCUGUGACGGGUUCUAUUUUCAACCCGUCACAGGUGACUAGUUACCUGUGACGGGU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
JB164538.1
ncRNA:23   UCUACUGAUCAAUGGACACUGCC   1
  |||**||||||*|||||||||||
targets:1   AGACAACUAGUCACCUGUGACGG   23

2.5 Sequence 2202 from Patent EP2559767 NA coding protein psRNATarget
HI404077.1
ncRNA:23   UCUACUGAUCAAUGGACACUGCC   1
  |||**||||||*|||||||||||
targets:1   AGACAACUAGUCACCUGUGACGG   23

2.5 Sequence 2202 from Patent EP2074227 NA coding protein psRNATarget
LQ236207.1
ncRNA:23   UCUACUGAUCAAUGGACACUGCC   1
  |||**||||||*|||||||||||
targets:1   AGACAACUAGUCACCUGUGACGG   23

2.5 Sequence 2202 from Patent EP2985353 NA coding protein psRNATarget