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BaseInfo

ncRNA ID novel_osa_miR696
Species Oryza sativa
Class miRNA
Genome position Chr1:14696999-14697058 [-]
Reference genome IRGSP-1.0
Source SRR1742988
Length 24
Mature sequence(if miRNA) 37 - ACAUCACCCUCGGGCCUGACCCCC - 60
Stem-loop(if miRNA) -AC       U  -            C CC
   AUCACCC CG GGCCUGACCCCC C  C
   ||||||| || |||||||||||| |
   UAGUGGG GC CCGGACUGGGGG G  C
CGU       U  A            A CC
Stem-loop sequence ACAUCACCCUCGGGCCUGACCCCCCCCCCCCCGAGGGGGUCAGGCCACGUGGGUGAUUGC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
AK060991.1
ncRNA:24   CCCCCAGUCCGGGCUCCCACUACA   1
  |||||||=||||||||||||||||
targets:266   GGGGGUCGGGCCCGAGGGUGAUGU   289

1.0 Oryza sativa Japonica Group cDNA clone:006-203-D03, full insert sequence NA coding protein psRNATarget
XM_015758984.1
ncRNA:24   CCCCCAGUCCGGGCUCCCACUACA   1
  |||||||=|||||||||||||||*
targets:1813   GGGGGUCGGGCCCGAGGGUGAUGA   1836

2.0 PREDICTED: Oryza sativa Japonica Group uncharacterized LOC107279220 (LOC107279220), mRNA uncharacterized LOC107279220(LOC107279220) coding protein psRNATarget
AK287913.1
ncRNA:24   CCCCCAGUCCGGGCUCCCACUACA   1
  |||||||=|||||||||||||*||
targets:742   GGGGGUCGGGCCCGAGGGUGACGU   765

2.5 Oryza sativa Japonica Group cDNA, clone: J065213K16, full insert sequence NA coding protein psRNATarget