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BaseInfo

ncRNA ID	novel_osa_miR688
Species	Oryza sativa
Class	miRNA
Genome position	Chr8:1219779-1219824 [-]
Reference genome	IRGSP-1.0
Source	SRR1742988;SRR1742995;SRR1743006;SRR2040399;SRR2040406;SRR3123630;SRR3234041;SRR3234042;SRR3234043;SRR5049783;SRR5049792;SRR1609312;SRR1609313;SRR1609315;SRR1609316;SRR1738216;SRR1738225
Length	19
Mature sequence(if miRNA)	28 - AAACCUGGCUCUGAUACCA - 46
Stem-loop(if miRNA)	--     UGG  CU    --   U   AAACC   CU  GAUA  CCA U   |||||   ||  ||||  |||   UUUGG   GG  UUGU  GGU G GG     CUA  UU    UA   U
Stem-loop sequence	AAACCUGGCUCUGAUACCAUUGUUGGAUUGUUUUGGAUCGGUUUGG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
AK103785.1	ncRNA:19   ACCAUAGUCUCGGUCCAAA   1   ||||||||||||=|||||* targets:24   UGGUAUCAGAGCUAGGUUG   42 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA clone:J033145I11, full insert sequence	NA	coding protein	psRNATarget
AK106958.1	ncRNA:19   ACCAUAGUCUCGGUCCAAA   1   ||||||||||||*|||||| targets:132   UGGUAUCAGAGCAAGGUUU   150 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA clone:002-119-E11, full insert sequence	NA	coding protein	psRNATarget
XM_015783452.1	ncRNA:19   ACCAUAGUCUCGGUCCAAA   1   ||||||||||||*|||||| targets:132   UGGUAUCAGAGCAAGGUUU   150 Target Full Sequence	1.5	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC9266127 (LOC9266127), transcript variant X2, mRNA	uncharacterized LOC9266127(LOC9266127)	coding protein	psRNATarget
AK100359.1	ncRNA:19   ACCAUAGUCUCGGUCCAAA   1   ||||||||||||*|||||| targets:133   UGGUAUCAGAGCAAGGUUU   151 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA clone:J023083K23, full insert sequence	NA	coding protein	psRNATarget
AK109539.1	ncRNA:19   ACCAUAGUCUCGGUCCAAA   1   ||||||||||||*|||||| targets:134   UGGUAUCAGAGCAAGGUUU   152 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA clone:002-119-G07, full insert sequence	NA	coding protein	psRNATarget
XM_015783451.1	ncRNA:19   ACCAUAGUCUCGGUCCAAA   1   ||||||||||||*|||||| targets:134   UGGUAUCAGAGCAAGGUUU   152 Target Full Sequence	1.5	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC9266127 (LOC9266127), transcript variant X1, mRNA	uncharacterized LOC9266127(LOC9266127)	coding protein	psRNATarget
AK120806.1	ncRNA:19   ACCAUAGUCUCGGUCCAAA   1   ||||||||||||*|||||| targets:141   UGGUAUCAGAGCAAGGUUU   159 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA clone:J023013I10, full insert sequence	NA	coding protein	psRNATarget