Search result

BaseInfo

ncRNA ID	novel_osa_miR673
Species	Oryza sativa
Class	miRNA
Genome position	Chr11:13156983-13157144 [-]
Reference genome	IRGSP-1.0
Source	SRR1555746;SRR1556014
Length	24
Mature sequence(if miRNA)	139 - GAUCGGCUGUAGAUAUUAAUGGUA - 162
Stem-loop(if miRNA)	--          AGA   U    G A      A    -CAUC        --CUUAA   -        AGG    -A     CG   GAUCGGCUGU   UAU AAUG U UAUAAU CUUC     AAUAUAUA       AUC AAGUGAUU   AUAG  UCGGU  C   ||||||||||   ||| |||| | |||||| ||||     ||||||||       ||| ||||||||   ||||  |||||   CUAGCCGAUA   AUA UUAC A AUAUUA GAAG     UUAUAUAU       UAG UUCACUAA   UGUC  AGUCG  C GA          -CG   C    G -      -    AACAA        AUAAAAC   A        AUA    AG     UA
Stem-loop sequence	GAUCGGCUGUAGAUAUUAAUGGUAUAUAAUACUUCCAUCAAUAUAUACUUAAAUCAAGUGAUUAGGAUAGAUCGGUCGCCAUGCUGAGACUGUAUAAAUCACUUAGAUCAAAAUAUAUAUAUUAACAAGAAGAUUAUAAGCAUUCAUAGCAUAGCCGAUCAG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
HI404346.1	ncRNA:24   AUGGUAAUUAUAGAUGUCGGCUAG   1   ||===*|||*|||||||||||||| targets:165   UAUUGCUAACAUCUACAGCCGAUC   188 Target Full Sequence	2.0	Sequence 2471 from Patent EP2074227	NA	coding protein	psRNATarget
LQ236476.1	ncRNA:24   AUGGUAAUUAUAGAUGUCGGCUAG   1   ||===*|||*|||||||||||||| targets:165   UAUUGCUAACAUCUACAGCCGAUC   188 Target Full Sequence	2.0	Sequence 2471 from Patent EP2985353	NA	coding protein	psRNATarget
JB164807.1	ncRNA:24   AUGGUAAUUAUAGAUGUCGGCUAG   1   ||===*|||*|||||||||||||| targets:165   UAUUGCUAACAUCUACAGCCGAUC   188 Target Full Sequence	2.0	Sequence 2471 from Patent EP2559767	NA	coding protein	psRNATarget