Search result

BaseInfo

ncRNA ID novel_osa_miR662
Species Oryza sativa
Class miRNA
Genome position Chr7:13898750-13898813 [+]
Reference genome IRGSP-1.0
Source SRR1742988
Length 24
Mature sequence(if miRNA) 41 - UCAGACCGGUAGAUCAAUCUCGGU - 64
Stem-loop(if miRNA) --    --      AU       A      C GC
  CGGG  UGAUCU  ACCGGUC GACCGA G  A
  ||||  ||||||  ||||||| |||||| |  U
  GCUC  ACUAGA  UGGCCAG CUGGUU C  C
UG    UA      --       A      - AC
Stem-loop sequence CGGGUGAUCUAUACCGGUCAGACCGACGGCAUCCACUUGGUCAGACCGGUAGAUCAAUCUCGGU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
AK288809.1
ncRNA:24   UGGCUCUAACUAGAUGGCCAGACU   1
  ||||||||||||||=|||||||||
targets:671   ACCGAGAUUGAUCUGCCGGUCUGA   694

1.5 Oryza sativa Japonica Group cDNA, clone: J090071N20, full insert sequence NA coding protein psRNATarget