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BaseInfo

ncRNA ID	novel_osa_miR657
Species	Oryza sativa
Class	miRNA
Genome position	Chr6:7824032-7824106 [-]
Reference genome	IRGSP-1.0
Source	SRR1742988;SRR1742996;SRR1743002;SRR1743006;SRR1849769;SRR1849771;SRR1849772;SRR1849773;SRR1849775;SRR2040381;SRR2040382;SRR2040386;SRR2040392;SRR2040399;SRR2040403;SRR2040405;SRR2040409;SRR2857734;SRR3123645;SRR3234040;SRR5049787;SRR1654490;SRR1738210;SRR1738224;SRR1738226;SRR1738227
Length	24
Mature sequence(if miRNA)	1 - GAAAAUCAUUUUCGCAGGCGGACC - 24
Stem-loop(if miRNA)	--   A           A              GA  ACU   UCC CCUGCGAAAAU GAUUUUUGCAGGCG  CC   U   ||| ||||||||||| ||||||||||||||  ||   AGG GGACGCUUUUA CUAAAAGCGUCCGC  GG   A CC   C           -              --  CUA
Stem-loop sequence	UCCACCUGCGAAAAUAGAUUUUUGCAGGCGGACCACUUAAUCGGCGCCUGCGAAAAUCAUUUUCGCAGGCGGACC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
CT827932.1	ncRNA:24   CCAGGCGGACGCUUUUACUAAAAG   1   ||*|||||||=||||||||||||= targets:1761   GGACCGCCUGUGAAAAUGAUUUUU   1784 Target Full Sequence	2.0	Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA108G07, full insert sequence	NA	coding protein	psRNATarget
AK120802.1	ncRNA:24   CCAGGCGGACGCUUUUACUAAAAG   1   ||--||||||=||||||||||||| targets:512   GG--CGCCUGUGAAAAUGAUUUUC   533 Target Full Sequence	1.0	Oryza sativa Japonica Group cDNA clone:J023013A15, full insert sequence	NA	coding protein	psRNATarget
AK288934.1	ncRNA:24   CCAG---GCGGACGCUUUUACUAAAAG   1   *|||---|||||||||||||*|||||= targets:3387   AGUCAACCGCCUGCGAAAAUCAUUUUU   3413 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA, clone: J090082I21, full insert sequence	NA	coding protein	psRNATarget
AK107035.1	ncRNA:24   CCAGGCGGACGCUUUUACUAAAAG   1   ||-|||||**|||||||||||||| targets:663   GG-CCGCCAACGAAAAUGAUUUUC   685 Target Full Sequence	2.0	Oryza sativa Japonica Group cDNA clone:002-121-B08, full insert sequence	NA	coding protein	psRNATarget