| ncRNA ID | novel_osa_miR641 |
| Species | Oryza sativa |
| Class | miRNA |
| Genome position | Chr5:10535070-10535200 [+] |
| Reference genome | IRGSP-1.0 |
| Source | SRR1742988;SRR1742989;SRR1742990;SRR1742991;SRR1742993;SRR2040385;SRR2040392;SRR2040394;SRR2040396;SRR2040404;SRR3234044;SRR1738211;SRR1738212;SRR1738214;SRR1738216;SRR1738219;SRR1738221;SRR1738223 |
| Length | 24 |
| Mature sequence(if miRNA) | 108 - ACUAUUACUUUAUCGGAUGAAGAA - 131 |
| Stem-loop(if miRNA) |
-- C UU C C G A C U CUUCAUCCGA AAAGUGAU GUAA AUUGUU ACAAAAU UAUAUAUCUUUU UAUA UUUA U |||||||||| |||||||| |||| |||||| ||||||| |||||||||||| |||| |||| GAAGUAGGCU UUUCAUUA CAUU UAACAA UGUUUUA AUAUAUAGGGAG AUAU AAAU U AA A -U A U A A C A |
| Stem-loop sequence | CUUCAUCCGACAAAGUGAUUUGUAACAUUGUUCACAAAAUGUAUAUAUCUUUUAUAUACUUUAUUUAUAAACUAUAAGAGGGAUAUAUAAAUUUUGUUAACAAUAUUACUAUUACUUUAUCGGAUGAAGAA |
| Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AK106710.1 |
|
2.5 | Oryza sativa Japonica Group cDNA clone:002-114-F03, full insert sequence | NA | coding protein | psRNATarget |