ncRNA ID | novel_osa_miR633 |
Species | Oryza sativa |
Class | miRNA |
Genome position | Chr1:7314411-7314531 [+] |
Reference genome | IRGSP-1.0 |
Source | SRR1742988 |
Length | 21 |
Mature sequence(if miRNA) | 101 - UCGGACGUCCAUUUUUUGAUC - 121 |
Stem-loop(if miRNA) |
--          A             C       C   U     A   AUUUU        AU   UCGAAAAAUG AUGUCUGAGAUUC UCUACGU AUC CGAGU AAA     ACUCAUGG  G   |||||||||| ||||||||||||| ||||||| ||| ||||| |||     ||||||||   AGUUUUUUAC UGCAGGCUUUAAG AGGUGCA UAG GCUCA UUU     UGAGUACU  U CU          C             C       U   U     A   -----        CA |
Stem-loop sequence | UCGAAAAAUGAAUGUCUGAGAUUCCUCUACGUCAUCUCGAGUAAAAAUUUUACUCAUGGAUGUACUCAUGAGUUUUAACUCGUGAUUACGUGGACGAAUUUCGGACGUCCAUUUUUUGAUC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_015789578.1 |
|
1.0 | PREDICTED: Oryza sativa Japonica Group protein SRC2 (LOC9270916), mRNA | protein SRC2(LOC9270916) | coding protein | psRNATarget | |||||||||
AK288313.1 |
|
2.5 | Oryza sativa Japonica Group cDNA, clone: J090021D10, full insert sequence | NA | coding protein | psRNATarget |