ncRNA ID | novel_osa_miR625 |
Species | Oryza sativa |
Class | miRNA |
Genome position | Chr3:23760185-23760385 [+] |
Reference genome | IRGSP-1.0 |
Source | SRR1742988 |
Length | 24 |
Mature sequence(if miRNA) | 1 - AACGUAGAUUAUCGACAAAACCGA - 24 |
Stem-loop(if miRNA) |
--A           C     A   G         C                                U              A   ---A    C    UAC    ACGUAGAUUAU GACAA ACC AUUCCAUAA CCCUAGGCUAUUUUGCGAGACGAAUCUAAUGA GUAUAUUAAUCCAU AUU    GCGG UGAU   U    ||||||||||| ||||| ||| ||||||||| |||||||||||||||||||||||||||||||| |||||||||||||| |||    |||| ||||   G    UGUAUCUAAUG CUGUU UGG UAAGGUAUU GGGAUCCGAUAAAACGCUCUGCUUAGAUUGCU CAUAUAAUUAGGUA UAA    UGUC ACUA   U AUC           A     C   G         U                                C              C   ACUA    -    CGA |
Stem-loop sequence | AACGUAGAUUAUCGACAAAACCGAUUCCAUAACCCCUAGGCUAUUUUGCGAGACGAAUCUAAUGAUGUAUAUUAAUCCAUAAUUAGCGGCUGAUUACUGUAGCAUCACUGUAUCAAAUCAUGGAUUAAUAUACCUCGUUAGAUUCGUCUCGCAAAAUAGCCUAGGGUUUAUGGAAUGGGUCUUGUCAGUAAUCUAUGUCUA |