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BaseInfo

ncRNA ID novel_osa_miR625
Species Oryza sativa
Class miRNA
Genome position Chr3:23760185-23760385 [+]
Reference genome IRGSP-1.0
Source SRR1742988
Length 24
Mature sequence(if miRNA) 1 - AACGUAGAUUAUCGACAAAACCGA - 24
Stem-loop(if miRNA) --A           C     A   G         C                                U              A   ---A    C    UAC
   ACGUAGAUUAU GACAA ACC AUUCCAUAA CCCUAGGCUAUUUUGCGAGACGAAUCUAAUGA GUAUAUUAAUCCAU AUU    GCGG UGAU   U
   ||||||||||| ||||| ||| ||||||||| |||||||||||||||||||||||||||||||| |||||||||||||| |||    |||| ||||   G
   UGUAUCUAAUG CUGUU UGG UAAGGUAUU GGGAUCCGAUAAAACGCUCUGCUUAGAUUGCU CAUAUAAUUAGGUA UAA    UGUC ACUA   U
AUC           A     C   G         U                                C              C   ACUA    -    CGA
Stem-loop sequence AACGUAGAUUAUCGACAAAACCGAUUCCAUAACCCCUAGGCUAUUUUGCGAGACGAAUCUAAUGAUGUAUAUUAAUCCAUAAUUAGCGGCUGAUUACUGUAGCAUCACUGUAUCAAAUCAUGGAUUAAUAUACCUCGUUAGAUUCGUCUCGCAAAAUAGCCUAGGGUUUAUGGAAUGGGUCUUGUCAGUAAUCUAUGUCUA