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BaseInfo

ncRNA ID	novel_osa_miR610
Species	Oryza sativa
Class	miRNA
Genome position	Chr2:11147792-11147945 [+]
Reference genome	IRGSP-1.0
Source	SRR1742988
Length	24
Mature sequence(if miRNA)	1 - AAUCAUGUGGCGCUGAACUUAGAC - 24
Stem-loop(if miRNA)	--A     G             A       C       AAUAGUG             -GC  UG CACGCUGACUUAG    AUCAU UGGCGCUGAACUU GACAUCU AGCGCCA       UGGCGCUGAAUGU   GU  G             C    ||||| ||||||||||||| ||||||| |||||||       |||||||||||||   ||  |    UAGUA ACCGCGACUUGAA CUGUGGA UCGCGGU       ACCGCGACUUACG   CG  G             C GUG     G             -       A       GCAGAUG             GCA  -- UAGCGCCUACCCU
Stem-loop sequence	AAUCAUGUGGCGCUGAACUUAGACAUCUCAGCGCCAAAUAGUGUGGCGCUGAAUGUGCGUUGGCACGCUGACUUAGCCUCCCAUCCGCGAUGGCACGGCAUUCAGCGCCAGUAGACGUGGCGCUAAGGUGUCAAGUUCAGCGCCAGAUGAUGUG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
AK105004.2	ncRNA:24   CAGAUUCAAGUCGCGGUGUACUAA   1   ||||||||||*||||||||||||| targets:396   GUCUAAGUUCCGCGCCACAUGAUU   419 Target Full Sequence	1.0	Oryza sativa Japonica Group cDNA clone:001-006-B03, full insert sequence	NA	coding protein	psRNATarget
XM_015766258.1	ncRNA:24   CAGAUUCAAGUCGCGGUGUACUAA   1   ||||||||||*||||||||||||| targets:1221   GUCUAAGUUCCGCGCCACAUGAUU   1244 Target Full Sequence	1.0	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC9269164 (LOC9269164), mRNA	uncharacterized LOC9269164(LOC9269164)	coding protein	psRNATarget
XM_015770638.1	ncRNA:24   CAGAUUCAAGUCGCGGUGUACUAA   1   |||||||||||||||||*|||||| targets:513   GUCUAAGUUCAGCGCCAAAUGAUU   536 Target Full Sequence	1.5	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4329649 (LOC4329649), transcript variant X2, mRNA	uncharacterized LOC4329649(LOC4329649)	coding protein	psRNATarget
XM_015770637.1	ncRNA:24   CAGAUUCAAGUCGCGGUGUACUAA   1   |||||||||||||||||*|||||| targets:513   GUCUAAGUUCAGCGCCAAAUGAUU   536 Target Full Sequence	1.5	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4329649 (LOC4329649), transcript variant X1, mRNA	uncharacterized LOC4329649(LOC4329649)	coding protein	psRNATarget
XM_015787749.1	ncRNA:24   CAGAUUCAAGUCGCGGUGUACUAA   1   *|||||*||||||||||=|||||| targets:57   AUCUAAAUUCAGCGCCAUAUGAUU   80 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group probable receptor-like protein kinase At5g39020 (LOC4326071), mRNA	probable receptor-like protein kinase At5g39020(LOC4326071)	coding protein	psRNATarget