ncRNA ID | novel_osa_miR600 |
Species | Oryza sativa |
Class | miRNA |
Genome position | Chr12:3477656-3477756 [-] |
Reference genome | IRGSP-1.0 |
Source | SRR1742988;SRR1742990;SRR1742992;SRR1742993;SRR1742994;SRR1742995;SRR1742996;SRR4407958;SRR5049789;SRR5049792;SRR1738209;SRR1738210;SRR1738222;SRR1738223;SRR1738224 |
Length | 24 |
Mature sequence(if miRNA) | 1 - AUCUUAAUAUAGAGUGGUAUUGGA - 24 |
Stem-loop(if miRNA) |
--AU     -              C   UU   UUA   -       U  UC     AUGCC CUUUAUAUUAAGAU UUA  GCA   AAG UAUAUUA GG  G     ||||| |||||||||||||| |||  |||   ||| ||||||| ||     UAUGG GAGAUAUAAUUCUA AAU  UGU   UUC AUAUAGU CU  U AGGU     U              U   UU   UUG   U       -  GU |
Stem-loop sequence | AUAUGCCCUUUAUAUUAAGAUCUUAUUGCAUUAAAGUAUAUUAUGGUCGUUGUCUGAUAUAUCUUGUUUGUUUUAAUAUCUUAAUAUAGAGUGGUAUUGGA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
AK064569.1 |
|
1.0 | Oryza sativa Japonica Group cDNA clone:002-112-D07, full insert sequence | NA | coding protein | psRNATarget | |||||||||
AK288616.1 |
|
1.0 | Oryza sativa Japonica Group cDNA, clone: J090054A10, full insert sequence | NA | coding protein | psRNATarget | |||||||||
AK288229.1 |
|
2.5 | Oryza sativa Japonica Group cDNA, clone: J090012M05, full insert sequence | NA | coding protein | psRNATarget |