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BaseInfo

ncRNA ID	novel_osa_miR598
Species	Oryza sativa
Class	miRNA
Genome position	Chr12:9585797-9585969 [-]
Reference genome	IRGSP-1.0
Source	SRR1742988;SRR1742991;SRR1742992;SRR1849774;SRR3123651;SRR1738209;SRR1738223;SRR1738240
Length	24
Mature sequence(if miRNA)	150 - UUUCUGUAUCCAACGUUUGACUGU - 173
Stem-loop(if miRNA)	--       A                    UC   A     UUUUUU     -----------UU  UAUUUUCAUUGUUGUUAGAUGAUAAA   UUUCUGU UCCAACGUUUGACUGUCCGU  UAU UGAAA      UAUAA             AG                          A   ||||||| ||||||||||||||||||||  ||| |||||      |||||             ||   AAAGGCA AGGUUGCAAACUGGCAGGCA  AUA ACUUU      AUAUU             CU                          U UU       C                    UA   A     --UUUU     UUUUUUAAUUUUU  AUUCAGUGCGUAUUUCAUAAUUAGUA
Stem-loop sequence	UUUCUGUAUCCAACGUUUGACUGUCCGUUCUAUAUGAAAUUUUUUUAUAAUUAGUAUUUUCAUUGUUGUUAGAUGAUAAAAUAUGAUUAAUACUUUAUGCGUGACUUAUCUUUUUAAUUUUUUUUAUAUUUUUUUCAAAUAAUACGGACGGUCAAACGUUGGACACGGAAAUU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
AK070410.1	ncRNA:24   UGUCAGUUUGCAACCUAUGUCUUU   1   |*||||||||||||||||||||=| targets:1109   AGAGUCAAACGUUGGAUACAGAGA   1132 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA clone:J023052N01, full insert sequence	NA	coding protein	psRNATarget
JB164349.1	ncRNA:24   UGUCAGUUUGCAACCUAUGUCUUU   1   |||*|=|||||||||||||=|||| targets:117   ACAAUUAAACGUUGGAUACGGAAA   140 Target Full Sequence	2.5	Sequence 2013 from Patent EP2559767	NA	coding protein	psRNATarget
LQ236018.1	ncRNA:24   UGUCAGUUUGCAACCUAUGUCUUU   1   |||*|=|||||||||||||=|||| targets:117   ACAAUUAAACGUUGGAUACGGAAA   140 Target Full Sequence	2.5	Sequence 2013 from Patent EP2985353	NA	coding protein	psRNATarget
HI403888.1	ncRNA:24   UGUCAGUUUGCAACCUAUGUCUUU   1   |||*|=|||||||||||||=|||| targets:117   ACAAUUAAACGUUGGAUACGGAAA   140 Target Full Sequence	2.5	Sequence 2013 from Patent EP2074227	NA	coding protein	psRNATarget
XM_015761929.1	ncRNA:24   UGUCAGUUUGCAACCUAUGUCUUU   1   ||=|||||||||||||*||||||| targets:27   ACGGUCAAACGUUGGACACAGAAA   50 Target Full Sequence	1.5	PREDICTED: Oryza sativa Japonica Group disease resistance protein RGA2 (LOC4350187), transcript variant X2, mRNA	disease resistance protein RGA2(LOC4350187)	coding protein	psRNATarget