ncRNA ID | novel_osa_miR593 |
Species | Oryza sativa |
Class | miRNA |
Genome position | Chr11:13520690-13520804 [-] |
Reference genome | IRGSP-1.0 |
Source | SRR1555746;SRR1555747;SRR1555749;SRR2097778;SRR2097779;SRR2098557;SRR2098560;SRR2098822;SRR2099567;SRR2099568;SRR2099745;SRR1556014;SRR4407775;SRR4407779;SRR4407953;SRR4407954;SRR4407955;SRR4407956;SRR1556016;SRR4407957;SRR4407958;SRR4407959;SRR4407960;SRR4407961;SRR4407962;SRR1556020 |
Length | 24 |
Mature sequence(if miRNA) | 1 - AAUGUUACUAUUACUUUGUCGGAU - 24 |
Stem-loop(if miRNA) |
--  A          UU           CACAAAAUG  C         A       U   CC ACAAAGUGAU  GUAACAUUAUU         UA AUAUCUCUU UAUAGUU A   || ||||||||||  |||||||||||         || ||||||||| |||||||   GG UGUUUCAUUA  CAUUGUAAUAA         AU UAUAGAGAG AUAUCAA U UA  C          -U           AUAUUUCAA  A         A       A |
Stem-loop sequence | CCAACAAAGUGAUUUGUAACAUUAUUCACAAAAUGUACAUAUCUCUUAUAUAGUUUAUAAACUAUAAGAGAGAUAUAUAAACUUUAUAAAUAAUGUUACUAUUACUUUGUCGGAU |