ncRNA ID | novel_osa_miR591 |
Species | Oryza sativa |
Class | miRNA |
Genome position | Chr10:6427381-6427508 [-] |
Reference genome | IRGSP-1.0 |
Source | SRR1742988 |
Length | 21 |
Mature sequence(if miRNA) | 108 - CAGACGGGAUCUCGACCUCGA - 128 |
Stem-loop(if miRNA) |
--   A     U               CA   C     A          C  U  C     UCU   CAG CGGGA CUCGACCUCGACAUC  UAU CCACU GAACUUGCUA CG UG CACUA   U   ||| ||||| |||||||||||||||  ||| ||||| |||||||||| || || |||||   GUC GCCCU GAGCUGGAGCUGUAG  AUA GGUGA CUUGAACGAU GU AC GUGAU   A UC   G     U               UC   U     G          A  U  A     UGU |
Stem-loop sequence | CAGACGGGAUCUCGACCUCGACAUCCAUAUCCCACUAGAACUUGCUACCGUUGCCACUAUCUUAUGUUAGUGACAUUGAUAGCAAGUUCGAGUGGUAUACUGAUGUCGAGGUCGAGUUCCCGGCUGCU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_015782803.1 |
|
3.0 | PREDICTED: Oryza sativa Japonica Group uncharacterized LOC107278430 (LOC107278430), mRNA | uncharacterized LOC107278430(LOC107278430) | coding protein | psRNATarget |