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BaseInfo

ncRNA ID	novel_osa_miR585
Species	Oryza sativa
Class	miRNA
Genome position	Chr12:6884111-6884256 [+]
Reference genome	IRGSP-1.0
Source	SRR1742988
Length	24
Mature sequence(if miRNA)	1 - GAGCAAUUUUACGGUACUCGAGGA - 24
Stem-loop(if miRNA)	--           C   A  C                      CUUUU           -          AGAU   GAGCAAUUUUA GGU CU GAGGAGGUACCAUGAGGUACCA     UUUAUUGUAAA UUUGGUACUU    A   ||||||||||| ||| || ||||||||||||||||||||||     ||||||||||| ||||||||||   CUCGUUAAAAU CCA GA CUCCUCCAUGGUACUCCAUGGU     AAAUAACAUUU AAACCAUGGA    C AA           A   G  A                      -UUUU           U          GUAU
Stem-loop sequence	GAGCAAUUUUACGGUACUCGAGGAGGUACCAUGAGGUACCACUUUUUUUAUUGUAAAUUUGGUACUUAGAUACUAUGAGGUACCAAAUUUUACAAUAAAUUUUUGGUACCUCAUGGUACCUCCUCAAGGACCAUAAAAUUGCUCAA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_015789833.1	ncRNA:24   AGGAGCUCAUGGCAUUUUAACGAG   1   |||||*|||||||||||||||||| targets:3327   UCCUCAAGUACCGUAAAAUUGCUC   3350 Target Full Sequence	1.0	PREDICTED: Oryza sativa Japonica Group receptor-like protein 12 (LOC4324067), mRNA	receptor-like protein 12(LOC4324067)	coding protein	psRNATarget
AK065584.1	ncRNA:24   AGGAGCUCAUGGCAUUUUAACGAG   1   |||||*||*||||||||||||||| targets:1472   UCCUCAAGAACCGUAAAAUUGCUC   1495 Target Full Sequence	2.0	Oryza sativa Japonica Group cDNA clone:J013033A03, full insert sequence	NA	coding protein	psRNATarget
AK120403.1	ncRNA:24   AGGAGCUCAUGGCAUUUUAACGAG   1   |||||*||*||||||||||||||| targets:1568   UCCUCAAGAACCGUAAAAUUGCUC   1591 Target Full Sequence	2.0	Oryza sativa Japonica Group cDNA clone:J013088K21, full insert sequence	NA	coding protein	psRNATarget
XM_015782130.1	ncRNA:24   AGGAGCUCAUGGCAUUUUAACGAG   1   |||||*||*||||||||||||||| targets:1932   UCCUCAAGAACCGUAAAAUUGCUC   1955 Target Full Sequence	2.0	PREDICTED: Oryza sativa Japonica Group leucine--tRNA ligase, cytoplasmic (LOC9272228), mRNA	leucine--tRNA ligase, cytoplasmic(LOC9272228)	coding protein	psRNATarget
XM_015779910.1	ncRNA:24   AGGAGCUCAUGGCAUUUUAACGAG   1   |||||*||*|*||||||||||||| targets:554   UCCUCAAGGAACGUAAAAUUGCUC   577 Target Full Sequence	3.0	PREDICTED: Oryza sativa Japonica Group pEARLI1-like lipid transfer protein 1 (LOC9272463), mRNA	pEARLI1-like lipid transfer protein 1(LOC9272463)	coding protein	psRNATarget