Search result

BaseInfo

ncRNA ID novel_osa_miR580
Species Oryza sativa
Class miRNA
Genome position Chr11:27298993-27299101 [-]
Reference genome IRGSP-1.0
Source SRR1742988
Length 24
Mature sequence(if miRNA) 1 - UCUGAACUCACCGAGAAUGGUCAC - 24
Stem-loop(if miRNA) --U   -        U  CG UG       ACUG    AAAC      GGU   - G
   ACU UUCUUGGU GA  U  GAGAUGG    AGAC    CCUUUA   GCC C C
   ||| |||||||| ||  |  |||||||    ||||    ||||||   ||| |
   UGG AAGAGCCA CU  A  CUCUAUU    UCUG    GGAAAU   CGG G A
CAC   U        -  CA GU       GCAA    --AA      AGU   A C
Stem-loop sequence UACUUUCUUGGUUGACGUUGGAGAUGGACUGAGACAAACCCUUUAGGUGCCCGCACGAGGCUGAUAAAGGAAGUCUAACGUUAUCUCUGAACUCACCGAGAAUGGUCAC