ncRNA ID | novel_osa_miR580 |
Species | Oryza sativa |
Class | miRNA |
Genome position | Chr11:27298993-27299101 [-] |
Reference genome | IRGSP-1.0 |
Source | SRR1742988 |
Length | 24 |
Mature sequence(if miRNA) | 1 - UCUGAACUCACCGAGAAUGGUCAC - 24 |
Stem-loop(if miRNA) |
--U   -        U  CG UG       ACUG    AAAC      GGU   - G    ACU UUCUUGGU GA  U  GAGAUGG    AGAC    CCUUUA   GCC C C    ||| |||||||| ||  |  |||||||    ||||    ||||||   ||| |    UGG AAGAGCCA CU  A  CUCUAUU    UCUG    GGAAAU   CGG G A CAC   U        -  CA GU       GCAA    --AA      AGU   A C |
Stem-loop sequence | UACUUUCUUGGUUGACGUUGGAGAUGGACUGAGACAAACCCUUUAGGUGCCCGCACGAGGCUGAUAAAGGAAGUCUAACGUUAUCUCUGAACUCACCGAGAAUGGUCAC |