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BaseInfo

ncRNA ID	novel_osa_miR569
Species	Oryza sativa
Class	miRNA
Genome position	Chr11:19317775-19317837 [+]
Reference genome	IRGSP-1.0
Source	SRR1742988;SRR1742989;SRR1742990;SRR1742991;SRR1742993;SRR1742995;SRR1743000;SRR1743002;SRR1743006;SRR2097778;SRR2098560;SRR2099567;SRR2099568;SRR2099745;SRR2099746;SRR2857734;SRR2857735;SRR2857736;SRR3123630;SRR3123645;SRR3123646;SRR3123648;SRR3123651;SRR3123652;SRR5049778;SRR5049779;SRR5049780;SRR5049781;SRR5049782;SRR5049783;SRR5049784;SRR5049785;SRR5049786;SRR5049787;SRR5049788;SRR5049789;SRR5049790;SRR5049791;SRR5049792;SRR5049793;SRR1738209;SRR1738210;SRR1738211;SRR1738214;SRR1738216;SRR1738217;SRR1738219;SRR1738221;SRR1738222;SRR1738223;SRR1738224;SRR1738225;SRR1738226;SRR1738227;SRR1738228;SRR1738235;SRR1738237;SRR1738240;SRR1738242
Length	22
Mature sequence(if miRNA)	42 - UGAGCUCGGGGGCGACCAGAUC - 63
Stem-loop(if miRNA)	--  C  C    -A           GCCAC   A   UC GG CGCC  CGAGCUCGGGG     CGG U   || || ||||  |||||||||||     ||| C   AG CC GCGG  GCUCGAGUCCU     GCC C CU  A  A    GG           -----   G
Stem-loop sequence	UCCGGCCGCCACGAGCUCGGGGGCCACCGGAUCCGCCGUCCUGAGCUCGGGGGCGACCAGAUC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
BT129457.1	ncRNA:22   CUAGACCAGCGGGGGCUCGAGU   1   |||||||||*|||||||||||= targets:386   GAUCUGGUCACCCCCGAGCUCG   407 Target Full Sequence	2.5	Oryza sativa clone RRlibC00067 mRNA sequence	NA	coding protein	psRNATarget
AK287567.1	ncRNA:22   CUAGACCAGCGGGGGCUCGAGU   1   ||*|||||=|=||||||||||| targets:3128   GAGCUGGUUGUCCCCGAGCUCA   3149 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA, clone: J065028B09, full insert sequence	NA	coding protein	psRNATarget
XM_015760248.1	ncRNA:22   CUAGACCAGCGGGGGCUCGAGU   1   ||*|*||||||||*|||||||| targets:444   GACCGGGUCGCCCACGAGCUCA   465 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group disease resistance protein RPP13 (LOC4351145), mRNA	disease resistance protein RPP13(LOC4351145)	coding protein	psRNATarget
AK241634.1	ncRNA:22   CUAGACCAGCGGGGGCUCGAGU   1   ***|||*|*||||||||||||* targets:290   CUGCUGCUGGCCCCCGAGCUCC   311 Target Full Sequence	3.0	Oryza sativa Japonica Group cDNA, clone: J065188E03, full insert sequence	NA	coding protein	psRNATarget
XM_015761455.1	ncRNA:22   CUAGACCAGCGGGGGCUCGAGU   1   ***|||*|*||||||||||||* targets:348   CUGCUGCUGGCCCCCGAGCUCC   369 Target Full Sequence	3.0	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC9271789 (LOC9271789), transcript variant X2, mRNA	uncharacterized LOC9271789(LOC9271789)	coding protein	psRNATarget
XM_015761454.1	ncRNA:22   CUAGACCAGCGGGGGCUCGAGU   1   ***|||*|*||||||||||||* targets:347   CUGCUGCUGGCCCCCGAGCUCC   368 Target Full Sequence	3.0	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC9271789 (LOC9271789), transcript variant X1, mRNA	uncharacterized LOC9271789(LOC9271789)	coding protein	psRNATarget