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BaseInfo

ncRNA ID	novel_osa_miR565
Species	Oryza sativa
Class	miRNA
Genome position	Chr11:5529380-5529482 [+]
Reference genome	IRGSP-1.0
Source	SRR1738244;SRR2890862;SRR3234045
Length	24
Mature sequence(if miRNA)	1 - AACUCCACUCUAGACCCAACUCCU - 24
Stem-loop(if miRNA)	--                C    C  AU   A         A  UGGAG    A   AACUCCACUCUAGACC AACU CU  AGC AAAUUUAGG GU     CUGU C   |||||||||||||||| |||| ||  ||| ||||||||| ||     |||| C   UUGAGGUGAGGUCUGG UUGA GA  UCG UUUAAAUCC CG     GACA A UG                A    A  CC   A         -  -----    A
Stem-loop sequence	AACUCCACUCUAGACCCAACUCCUAUAGCAAAAUUUAGGAGUUGGAGCUGUACCAAACAGGCCCUAAAUUUAGCUCCAGAAGUUAGGUCUGGAGUGGAGUUGU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
AK101220.1	ncRNA:24   UCCUCAACCCAGAUCUCACCUCAA   1   |*|||||||||||=|||||||||| targets:1073   AAGAGUUGGGUCUGGAGUGGAGUU   1096 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA clone:J033031C20, full insert sequence	NA	coding protein	psRNATarget
XM_015768148.1	ncRNA:24   UCCUCAACCCAGAUCUCACCUCAA   1   |*|||||||||||=|||||||||| targets:1102   AAGAGUUGGGUCUGGAGUGGAGUU   1125 Target Full Sequence	1.5	PREDICTED: Oryza sativa Japonica Group chorismate mutase 2 (LOC4328508), mRNA	chorismate mutase 2(LOC4328508)	coding protein	psRNATarget
AK070002.1	ncRNA:24   UCCUCAACCCAGAUCUCACCUCAA   1   ||||||||*||||=|||||||||| targets:2058   AGGAGUUGAGUCUGGAGUGGAGUU   2081 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA clone:J023034C21, full insert sequence	NA	coding protein	psRNATarget