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BaseInfo

ncRNA ID	novel_osa_miR549
Species	Oryza sativa
Class	miRNA
Genome position	Chr9:22302238-22302340 [+]
Reference genome	IRGSP-1.0
Source	SRR1738244;SRR1742988;SRR1742989;SRR1742991;SRR1742992;SRR1742994;SRR1742996;SRR1743000;SRR1743006;SRR1849769;SRR1849771;SRR1849772;SRR1849774;SRR1849775;SRR1849776;SRR1849784;SRR2040380;SRR2040385;SRR2040388;SRR2040390;SRR2040391;SRR2040392;SRR2040394;SRR2040396;SRR2040399;SRR2040400;SRR2040403;SRR2040404;SRR2040405;SRR2040406;SRR2040408;SRR2040409;SRR2857728;SRR2857730;SRR2857731;SRR2857733;SRR2857735;SRR3123646;SRR3123650;SRR1738209;SRR1738210;SRR1738211;SRR1738216;SRR1738217;SRR1738219;SRR1738227;SRR1738228;SRR1738237;SRR1738239
Length	24
Mature sequence(if miRNA)	80 - GUUACGAGAUGUAGAAGUUGAAUU - 103
Stem-loop(if miRNA)	--                 AC          ----     UUUGACUGUGAAU   UUCAACUUUUACAUCUC  AACGGAAAAA    AUAGU             A   |||||||||||||||||  ||||||||||    |||||             U   AAGUUGAAGAUGUAGAG  UUGUUUUUUU    UUGGU             A UU                 CA          UUAU     AUCGAUCAAUUAC
Stem-loop sequence	UUCAACUUUUACAUCUCACAACGGAAAAAAUAGUUUUGACUGUGAAUAUACAUUAACUAGCUAUGGUUUAUUUUUUUUUGUUACGAGAUGUAGAAGUUGAAUU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_015793191.1	ncRNA:24   UUAAGUUGAAGAUGUAGAGCAUUG   1   |||||||=||*||||||||||||| targets:454   AAUUCAAUUUAUACAUCUCGUAAC   477 Target Full Sequence	2.0	PREDICTED: Oryza sativa Japonica Group probable receptor-like protein kinase At1g67000 (LOC4327950), transcript variant X1, mRNA	probable receptor-like protein kinase At1g67000(LOC4327950)	coding protein	psRNATarget
XM_015792915.1	ncRNA:24   UUAAGUUGAAGAUGUAGAGCAUUG   1   ||||=|||||||||||||||*||| targets:1889   AAUUUAACUUCUACAUCUCGCAAC   1912 Target Full Sequence	1.5	PREDICTED: Oryza sativa Japonica Group UDP-glycosyltransferase 89B1 (LOC4345896), transcript variant X1, mRNA	UDP-glycosyltransferase 89B1(LOC4345896)	coding protein	psRNATarget
XM_015793197.1	ncRNA:24   UUAAGUUGAAGAUGUAGAGCAUUG   1   |||||||=||*||||||||||||| targets:456   AAUUCAAUUUAUACAUCUCGUAAC   479 Target Full Sequence	2.0	PREDICTED: Oryza sativa Japonica Group probable receptor-like protein kinase At1g67000 (LOC4327950), transcript variant X2, mRNA	probable receptor-like protein kinase At1g67000(LOC4327950)	coding protein	psRNATarget