ncRNA ID | novel_osa_miR548 |
Species | Oryza sativa |
Class | miRNA |
Genome position | Chr9:9591961-9592074 [+] |
Reference genome | IRGSP-1.0 |
Source | SRR1738244 |
Length | 24 |
Mature sequence(if miRNA) | 91 - GAACUCACCGAGAACGGUUACGUG - 114 |
Stem-loop(if miRNA) |
--U   -  -        U  CA        U   -UC    AAAC      GGU   - G    GUA CU UUCUUGGU GA  UCGGAGAU GAC   AGAC    CCUUUA   GUC C C    ||| || |||||||| ||  |||||||| |||   ||||    ||||||   ||| |    CAU GG AAGAGCCA CU  AGUCUCUA UUG   UCUG    GGAAAU   CGG G A GUG   U  C        -  CA        -   CAA    --AA      AGU   A C |
Stem-loop sequence | UGUACUUUCUUGGUUGACAUCGGAGAUUGACUCAGACAAACCCUUUAGGUGUCCGCACGAGGCUGAUAAAGGAAGUCUAACGUUAUCUCUGAACUCACCGAGAACGGUUACGUG |