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BaseInfo

ncRNA ID	novel_osa_miR543
Species	Oryza sativa
Class	miRNA
Genome position	Chr8:26439236-26439410 [+]
Reference genome	IRGSP-1.0
Source	SRR1738244;SRR2040385;SRR2040394;SRR2040403;SRR2040405;SRR2040410;SRR2040411;SRR2857735;SRR3123651;SRR5049781;SRR5049787;SRR5049792;SRR5351737;SRR5351738;SRR5351739;SRR5351740;SRR5351742;SRR1738240;SRR1738241
Length	24
Mature sequence(if miRNA)	1 - GACUUUUUGAUAAACGUUUGACCU - 24
Stem-loop(if miRNA)	--  C        A           U           CAAAAAA         U     -U      -       A     --UU   CA   GA UUUUUGAU AACGUUUGACC UUCGUCUUAUU       UUUAUGUAA UAUAA  UUAUUU UAUUAUG CUUGA    UAU  U   || |||||||| ||||||||||| |||||||||||       ||||||||| |||||  |||||| ||||||| |||||    |||   CU AAAAAUUA UUGCAAACUGG GAGUAGAAUAA       AAAUACGUU AUAUU  AAUGAA AUAGUAU GAAUU    AUA  C AA  A        A           U           AUUAAAA         U     UU      U       -     UCUU   AA
Stem-loop sequence	GACUUUUUGAUAAACGUUUGACCUUUCGUCUUAUUCAAAAAAUUUAUGUAAUUAUAAUUUAUUUUAUUAUGACUUGAUUUAUCAUCAAAUAUUCUUUAAGUAUGAUAUAAGUAAUUUUAUAUUUGCAUAAAAAAAUUAAAUAAGAUGAGUGGUCAAACGUUAAUUAAAAAAUCAA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
CT835080.1	ncRNA:24   UCCAGUUUGCAAAUAGUUUUUCAG   1   |||||||||||||=|||||||||| targets:1133   AGGUCAAACGUUUGUCAAAAAGUC   1156 Target Full Sequence	1.5	Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSN071I07, full insert sequence	NA	coding protein	psRNATarget
AK068361.1	ncRNA:24   UCCAGUUUGCAAAUAGUUUUUCAG   1   **|||||||||||||||||||||| targets:743   UAGUCAAACGUUUAUCAAAAAGUC   766 Target Full Sequence	0.0	Oryza sativa Japonica Group cDNA clone:J013146F13, full insert sequence	NA	coding protein	psRNATarget
AK288703.1	ncRNA:24   UCCAGUUUGCAAAUAGUUUUUCAG   1   ||*|||||=||||=|||||||||| targets:3206   AGAUCAAAUGUUUGUCAAAAAGUC   3229 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA, clone: J090061G13, full insert sequence	NA	coding protein	psRNATarget
AK241447.1	ncRNA:24   UC-CAGUUUGCAAAUAGUUUUUCAG   1   ||-|*|||||*|||||||||||||= targets:1954   AGAGCCAAACAUUUAUCAAAAAGUU   1978 Target Full Sequence	2.0	Oryza sativa Japonica Group cDNA, clone: J065163F05, full insert sequence	NA	coding protein	psRNATarget