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BaseInfo

ncRNA ID	novel_osa_miR528
Species	Oryza sativa
Class	miRNA
Genome position	Chr10:14497178-14497346 [+]
Reference genome	IRGSP-1.0
Source	SRR1738244
Length	20
Mature sequence(if miRNA)	1 - UUUUCGAUCAACGUUUGACU - 20
Stem-loop(if miRNA)	--UUUUCGA                         C     U         A   ------------GA    AUUUAUGUCCAGCUUAAA          UCAACGUUUGACUGUUUGUUUUAUU AAAAG UUUAUGUAA UAU              AAAU                  G          ||||||||||||||||||||||||| ||||| ||||||||| |||              ||||                  A          GGUUGCAAACUGGUAAGCAGAAUAA UUUUU AAAUACAUU AUA              ACUG                  A UGAAAAAUA                         A     U         G   GUAAAUAAAGCAAC    AACUAAGCAGUAGUUUAU
Stem-loop sequence	UUUUCGAUCAACGUUUGACUGUUUGUUUUAUUCAAAAGUUUUAUGUAAAUAUGAAAAUAUUUAUGUCCAGCUUAAAGAAUAUUUGAUGACGAAUCAAGUCACAACGAAAUAAAUGAUAGUUACAUAAAUUUUUUAAAUAAGACGAAUGGUCAAACGUUGGAUAAAAAGU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_015792366.1	ncRNA:20   UCAGUUUGCAACUAGCUUUU   1   =|||||||||||=||||||| targets:846   GGUCAAACGUUGGUCGAAAA   865 Target Full Sequence	1.5	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC9271886 (LOC9271886), mRNA	uncharacterized LOC9271886(LOC9271886)	coding protein	psRNATarget
AK287754.1	ncRNA:20   UCAGUUUGCAACUAGCUUUU   1   =|||||||||||=||||||| targets:854   GGUCAAACGUUGGUCGAAAA   873 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA, clone: J065157N06, full insert sequence	NA	coding protein	psRNATarget
AK105698.1	ncRNA:20   UCAGUUUGCAACUAGCUUUU   1   =|||||||||||=||||||| targets:1260   GGUCAAACGUUGGUCGAAAA   1279 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA clone:001-201-D03, full insert sequence	NA	coding protein	psRNATarget
AK103228.1	ncRNA:20   UCAGUUUGCAACUAGCUUUU   1   =|||||||||||=||||||= targets:2793   GGUCAAACGUUGGUCGAAAG   2812 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA clone:J033123C21, full insert sequence	NA	coding protein	psRNATarget
XM_015768863.1	ncRNA:20   UCAGUUUGCAACUAGCUUUU   1   =|||||||||||*||||||* targets:217   GGUCAAACGUUGUUCGAAAU   236 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC107279962 (LOC107279962), mRNA	uncharacterized LOC107279962(LOC107279962)	coding protein	psRNATarget
AK288521.1	ncRNA:20   UCAGUUUGCAACUAGCUUUU   1   =|||||||||||*||||||* targets:223   GGUCAAACGUUGUUCGAAAU   242 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA, clone: J090044A07, full insert sequence	NA	coding protein	psRNATarget