ncRNA ID | novel_osa_miR522 |
Species | Oryza sativa |
Class | miRNA |
Genome position | Chr6:17598457-17598534 [-] |
Reference genome | IRGSP-1.0 |
Source | SRR1738244;SRR1743006;SRR2857735;SRR1738216;SRR1738237 |
Length | 24 |
Mature sequence(if miRNA) | 55 - ACUUAGGACAAGGACGUGGCAUCC - 78 |
Stem-loop(if miRNA) |
--        CA      U            CCAACCAU   ACUUAGGA  AGGACG GGCAUCCUAUUA        C   ||||||||  |||||| ||||||||||||   UGGAUCCU  UCCUGC CCGUAGGAUAAU        G GA        AC      U            UAAAGCAC |
Stem-loop sequence | ACUUAGGACAAGGACGUGGCAUCCUAUUACCAACCAUCGCACGAAAUUAAUAGGAUGCCUCGUCCUCAUCCUAGGUAG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_015760145.1 |
|
3.0 | PREDICTED: Oryza sativa Japonica Group probable tRNA-splicing endonuclease subunit Sen2 (LOC4350867), mRNA | probable tRNA-splicing endonuclease subunit Sen2(LOC4350867) | coding protein | psRNATarget |