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BaseInfo

ncRNA ID	novel_osa_miR513
Species	Oryza sativa
Class	miRNA
Genome position	Chr5:9245644-9245716 [-]
Reference genome	IRGSP-1.0
Source	SRR1738244;SRR1742991;SRR1742994;SRR1742996;SRR1849766;SRR1849772;SRR1849784;SRR2040380;SRR2040382;SRR2040383;SRR2040389;SRR2040390;SRR2040391;SRR2040392;SRR2040394;SRR2040395;SRR2040397;SRR2040399;SRR2040402;SRR2040403;SRR2040404;SRR2040406;SRR2040407;SRR2040409;SRR2040410;SRR2040411;SRR2857731;SRR2857733;SRR3123645;SRR1609312;SRR1609316;SRR1738226;SRR1738227;SRR1738241
Length	24
Mature sequence(if miRNA)	1 - GAAAAUCAUUUUCGCAGGCGGACC - 24
Stem-loop(if miRNA)	--              -     C        GA UA U   UCCGCCUGCGAAAA GAUUU CGCAGGCG  C  C U   |||||||||||||| ||||| ||||||||  |  |   AGGCGGACGCUUUU CUAAA GUGUCCGC  G  G A CC              A     A        -- GC A
Stem-loop sequence	UCCGCCUGCGAAAAGAUUUCCGCAGGCGGACUACUUAAGCGGCGCCUGUGAAAAUCAUUUUCGCAGGCGGACC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
CT827932.1	ncRNA:24   CCAGGCGGACGCUUUUACUAAAAG   1   ||*|||||||=||||||||||||= targets:1761   GGACCGCCUGUGAAAAUGAUUUUU   1784 Target Full Sequence	2.0	Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA108G07, full insert sequence	NA	coding protein	psRNATarget
AK120802.1	ncRNA:24   CCAGGCGGACGCUUUUACUAAAAG   1   ||--||||||=||||||||||||| targets:512   GG--CGCCUGUGAAAAUGAUUUUC   533 Target Full Sequence	1.0	Oryza sativa Japonica Group cDNA clone:J023013A15, full insert sequence	NA	coding protein	psRNATarget
AK288934.1	ncRNA:24   CCAG---GCGGACGCUUUUACUAAAAG   1   *|||---|||||||||||||*|||||= targets:3387   AGUCAACCGCCUGCGAAAAUCAUUUUU   3413 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA, clone: J090082I21, full insert sequence	NA	coding protein	psRNATarget
AK107035.1	ncRNA:24   CCAGGCGGACGCUUUUACUAAAAG   1   ||-|||||**|||||||||||||| targets:663   GG-CCGCCAACGAAAAUGAUUUUC   685 Target Full Sequence	2.0	Oryza sativa Japonica Group cDNA clone:002-121-B08, full insert sequence	NA	coding protein	psRNATarget