ncRNA ID | novel_osa_miR502 |
Species | Oryza sativa |
Class | miRNA |
Genome position | Chr4:20340395-20340523 [-] |
Reference genome | IRGSP-1.0 |
Source | SRR1738244;SRR2099567;SRR2099568;SRR2099745;SRR2857734;SRR5351738;SRR5351739 |
Length | 24 |
Mature sequence(if miRNA) | 1 - AUGAGGUUGGUUUAUUUUGGGACG - 24 |
Stem-loop(if miRNA) |
--             A   A     A    A           A     --         AACACG   UCCCAAAAUAAAC AAC UCGUG UAGG UGUGACACAUC UAGUA  ACGAGUCUG      U   ||||||||||||| ||| ||||| |||| ||||||||||| |||||  |||||||||      A   AGGGUUUUAUUUG UUG AGUAU AUUU ACACUGUGUAG AUUAU  UGCUUAGAC      G GC             G   G     G    A           G     GU         CUAUAA |
Stem-loop sequence | UCCCAAAAUAAACAAACAUCGUGAUAGGAUGUGACACAUCAUAGUAACGAGUCUGAACACGUAGAAUAUCCAGAUUCGUUGUAUUAGGAUGUGUCACAAUUUAGUAUGAGGUUGGUUUAUUUUGGGACG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
AK111475.1 |
|
0.0 | Oryza sativa Japonica Group cDNA clone:002-183-F05, full insert sequence | NA | coding protein | psRNATarget | |||||||||
AK119335.1 |
|
0.0 | Oryza sativa Japonica Group cDNA clone:001-131-C06, full insert sequence | NA | coding protein | psRNATarget |