ncRNA ID | novel_osa_miR500 |
Species | Oryza sativa |
Class | miRNA |
Genome position | Chr4:21760755-21760916 [-] |
Reference genome | IRGSP-1.0 |
Source | SRR1738244;SRR1742992;SRR2040382;SRR2040384;SRR2040391;SRR1609314;SRR1609317;SRR1738209;SRR1738219 |
Length | 24 |
Mature sequence(if miRNA) | 139 - AUACCCGUCGACAAGGAUACACCC - 162 |
Stem-loop(if miRNA) |
AUACCCGUCGACAA G       C       CUUCAUUAAUCUUA       -UCGG         UC  UG ---      AAAAGU    UG  U               G AUACACC GUGAUGA              AUAUAUA     UCUAUUCUU  AG  U   GCUUAU      AGGG  UA G               | ||||||| |||||||              |||||||     |||||||||  ||  |   ||||||      ||||  ||               C UAUGUGG UAUUGCU              UGUGUGU     GGAUAGGAA  UC  G   UGAGUG      UUUU  GU U -------------- G       U       --------------       UUAUA         -U  GU GAG      -GGGAU    GU  U |
Stem-loop sequence | AUACCCGUCGACAAGGAUACACCCGUGAUGACUUCAUUAAUCUUAAUAUAUAUCGGUCUAUUCUUUCAGUGUGCUUAUAAAAGUAGGGUGUAUGUUUGUGUUUUUAGGGGUGAGUGAGGUGCUUAAGGAUAGGAUAUUUGUGUGUUCGUUAUUGGUGUAUGC |