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BaseInfo

ncRNA ID	novel_osa_miR479
Species	Oryza sativa
Class	miRNA
Genome position	Chr10:3012083-3012221 [-]
Reference genome	IRGSP-1.0
Source	SRR1738244;SRR1742991;SRR2040388;SRR2040401;SRR3123650;SRR5049785;SRR1738212;SRR1738239
Length	24
Mature sequence(if miRNA)	116 - AAAAUAUACUAGAGUUGUGGAGCU - 139
Stem-loop(if miRNA)	--                                 GCCU    GG          A    UAAAA          AAAAUAUACUAGAGUUGUGGAGCUGGGUUUAGG    GUUU  UACAGCUCCA CUCC     UUAACUCC   |||||||||||||||||||||||||||||||||    ||||  |||||||||| ||||     |||||||A   UUUUAUAUGAUCUCAAUACCUCGAUCCAAAUCU    CGAG  GUGUUGAGGU GAGG     AGUUGAGG UG                                 --AU    --          -    -UAUG
Stem-loop sequence	AAAAUAUACUAGAGUUGUGGAGCUGGGUUUAGGGCCUGUUUGGUACAGCUCCAACUCCUAAAAUUAACUCCAGGAGUUGAGUAUGGAGUGGAGUUGUGGAGCUAUCUAAACCUAGCUCCAUAACUCUAGUAUAUUUUGU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
AK121068.1	ncRNA:24   UCGAGGUGUUGAGAUCAUAUAAAA   1   ||||||||||||||||||*||||| targets:1242   AGCUCCACAACUCUAGUACAUUUU   1265 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA clone:J023061D24, full insert sequence	NA	coding protein	psRNATarget
XM_015756167.1	ncRNA:24   UCGAGGUGUUGAGAUCAUAUAAAA   1   ||||=|||||||||||||*||||| targets:748   AGCUUCACAACUCUAGUACAUUUU   771 Target Full Sequence	1.5	PREDICTED: Oryza sativa Japonica Group EG45-like domain containing protein (LOC107276928), mRNA	EG45-like domain containing protein(LOC107276928)	coding protein	psRNATarget
XM_015775467.1	ncRNA:24   UCGAGGUGUUGAGAUCAUAUAAAA   1   |||||=||||||||||||*||||| targets:1873   AGCUCUACAACUCUAGUACAUUUU   1896 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group elongation of fatty acids protein 3-like (LOC4333830), mRNA	elongation of fatty acids protein 3-like(LOC4333830)	coding protein	psRNATarget