ncRNA ID | novel_osa_miR474 |
Species | Oryza sativa |
Class | miRNA |
Genome position | Chr2:4763397-4763473 [-] |
Reference genome | IRGSP-1.0 |
Source | SRR1738244 |
Length | 20 |
Mature sequence(if miRNA) | 1 - AACAAAACUUGAGCUGUAGA - 20 |
Stem-loop(if miRNA) |
--   C         C                  -   A   UAC GCUUAAGUU UGUUUUAAAAUGAAGCUA AUU G   ||| ||||||||| |||||||||||||||||| |||   AUG CGAGUUCAA ACAAAAUUUUACUUCGAU UAG G AG   U         A                  C   U |
Stem-loop sequence | UACCGCUUAAGUUCUGUUUUAAAAUGAAGCUAAUUAGGUGAUCUAGCUUCAUUUUAAAACAAAACUUGAGCUGUAGA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_015783981.1 |
|
2.5 | PREDICTED: Oryza sativa Japonica Group putative rRNA methyltransferase (LOC4339641), mRNA | putative rRNA methyltransferase(LOC4339641) | coding protein | psRNATarget | |||||||||
AK101119.1 |
|
2.5 | Oryza sativa Japonica Group cDNA clone:J033025I04, full insert sequence | NA | coding protein | psRNATarget |