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BaseInfo

ncRNA ID	novel_osa_miR471
Species	Oryza sativa
Class	miRNA
Genome position	Chr2:6429123-6429285 [+]
Reference genome	IRGSP-1.0
Source	SRR1738244;SRR1738209;SRR1738223
Length	24
Mature sequence(if miRNA)	1 - UUUUCUUGCAACGUUUGACCACUC - 24
Stem-loop(if miRNA)	--UUUUC      C             C          ----AA      -    UAUUAUUUAUUUUAU     A    CUUU        UUGCAA GUUUGACCACUCG CUUAUUCAAA      UUUUUG AAAU               UUGUG CUUA    A        |||||| ||||||||||||| ||||||||||      |||||| ||||               ||||| ||||    U        AACGUU CAAACUGGUGAGC GAAUAAGUUU      AAAAAC UUUA               AACAU GAAU    U AAAAACA      A             A          AAAAAA      G    UAUUUUUUGCUUUUC     -    UCUA
Stem-loop sequence	UUUUCUUGCAACGUUUGACCACUCGCCUUAUUCAAAAAUUUUUGAAAUUAUUAUUUAUUUUAUUUGUGACUUACUUUAUUAUCUUAAGUACAACUUUUCGUUUUUUAUAUUUGCAAAAAAAAAAAUUUGAAUAAGACGAGUGGUCAAACAUUGCAAACAAAAA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
AK100009.1	ncRNA:24   CUCACCAGUUUGCAACGUUC-UUUU   1   ||||||||||||||||||||-|||| targets:1036   GAGUGGUCAAACGUUGCAAGCAAAA   1060 Target Full Sequence	3.0	Oryza sativa Japonica Group cDNA clone:J013138B09, full insert sequence	NA	coding protein	psRNATarget
AK064773.1	ncRNA:24   CUCACCAGUUUGCAACGUUC-UUUU   1   ||||||||||||||||||||-|||| targets:3056   GAGUGGUCAAACGUUGCAAGCAAAA   3080 Target Full Sequence	3.0	Oryza sativa Japonica Group cDNA clone:J013000A22, full insert sequence	NA	coding protein	psRNATarget
AK288319.1	ncRNA:24   CUCACCAGUUUGCAACGUUC-UUUU   1   ||||||||||||||||||||-|||| targets:1850   GAGUGGUCAAACGUUGCAAGUAAAA   1874 Target Full Sequence	3.0	Oryza sativa Japonica Group cDNA, clone: J090021O08, full insert sequence	NA	coding protein	psRNATarget
AK288920.1	ncRNA:24   CUCACCAGUUUGCAACGUUC-UUUU   1   *|||||||||||||||||||-|||| targets:4052   AAGUGGUCAAACGUUGCAAGCAAAA   4076 Target Full Sequence	3.0	Oryza sativa Japonica Group cDNA, clone: J090081L22, full insert sequence	NA	coding protein	psRNATarget
AK102017.1	ncRNA:24   CUCACCAGUUUGCAACGUUC-UUUU   1   ||*|||||||||||||||||-|||| targets:1055   GAAUGGUCAAACGUUGCAAGCAAAA   1079 Target Full Sequence	3.0	Oryza sativa Japonica Group cDNA clone:J033080F19, full insert sequence	NA	coding protein	psRNATarget