ncRNA ID | novel_osa_miR459 |
Species | Oryza sativa |
Class | miRNA |
Genome position | Chr1:23534414-23534635 [-] |
Reference genome | IRGSP-1.0 |
Source | SRR1738244 |
Length | 24 |
Mature sequence(if miRNA) | 1 - GGGGAUGGAUCCCGGCGCACGAGU - 24 |
Stem-loop(if miRNA) |
--       G     C   G      UC     UGC   C  C        UC  CCUA  A       -  U G   CA      ---     A      AC  A      CAA   UCGUGCG CGGGA CCA CCCCUG  CUCGU   CCU CU GUCCCCGU  CC    UC GCGGGAG AG A UUG  CGGCGC   AUGGC GGCGUC  GG GGACUC   C   ||||||| ||||| ||| ||||||  |||||   ||| || ||||||||  ||    || ||||||| || | |||  ||||||   ||||| ||||||  || ||||||   AGCACGC GCCCU GGU GGGGAC  GGGCG   GGA GA CAGGGGUA  GG    GG CGCCUUC UC U AAU  GCCGCG   UGCCG CCGCAG  UC CCUGGG   C UG       G     A   A      GA     CUA   A  A        GU  -UAC  C       G  U G   -C      CAC     -      -C  G      AAU |
Stem-loop sequence | UCGUGCGGCGGGACCCAGCCCCUGUCCUCGUUGCCCUCCUCGUCCCCGUUCCCCCUAUCAGCGGGAGAGUAGUUGCACGGCGCAUGGCAGGCGUCACGGAGGACUCCAACCUAAGGGUCCGCUCGACGCCGCCGUCACGCGCCGCUAAGUUCUGCUUCCGCCGGCAUGGUGAUGGGGACAAGAAGGAUCGCGGGAGCAGGGGAUGGAUCCCGGCGCACGAGU |