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BaseInfo

ncRNA ID	novel_osa_miR443
Species	Oryza sativa
Class	miRNA
Genome position	Chr12:10638896-10638986 [+]
Reference genome	IRGSP-1.0
Source	SRR1738244
Length	23
Mature sequence(if miRNA)	69 - CGGCACCUAUAAUAUAUUAUAGG - 91
Stem-loop(if miRNA)	--                        CUA     AA         U   UAUAAUAUAUUAUAGGUGCCGGUU   UUUAA  AACCGAUAU A   ||||||||||||||||||||||||   |||||  ||||||||| U   AUAUUAUAUAAUAUCCACGGCCAA   AAAUU  UUGGCUGUG A GG                        --A     AA         G
Stem-loop sequence	UAUAAUAUAUUAUAGGUGCCGGUUCUAUUUAAAAAACCGAUAUUAUAGGUGUCGGUUAAUUAAAAAACCGGCACCUAUAAUAUAUUAUAGG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
AK069235.1	ncRNA:23   GGAUAUUAUAUAAUAUCCACGGC   1   ||||||||||||||||||||=|| targets:3426   CCUAUAAUAUAUUAUAGGUGUCG   3448 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA clone:J023010D04, full insert sequence	NA	coding protein	psRNATarget
XM_015773629.1	ncRNA:23   GGAUAUUAUAUAAUAUCCACGGC   1   =||||||||||||||||||*||| targets:885   UCUAUAAUAUAUUAUAGGUACCG   907 Target Full Sequence	1.5	PREDICTED: Oryza sativa Japonica Group GDSL esterase/lipase At1g28650 (LOC4332910), mRNA	GDSL esterase/lipase At1g28650(LOC4332910)	coding protein	psRNATarget
AK288845.1	ncRNA:23   GGAUAUUAUAUAAUAUCCACGGC   1   |||||||*||||||||||||=|| targets:3740   CCUAUAAAAUAUUAUAGGUGUCG   3762 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA, clone: J090075D02, full insert sequence	NA	coding protein	psRNATarget
AK288922.1	ncRNA:23   GGAUAUUAUAUAAUAUCCACGGC   1   =||||||||||||||||||*||| targets:1080   UCUAUAAUAUAUUAUAGGUACCG   1102 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA, clone: J090081M23, full insert sequence	NA	coding protein	psRNATarget
XM_015773630.1	ncRNA:23   GGAUAUUAUAUAAUAUCCACGGC   1   =||||||||||||||||||*||| targets:1605   UCUAUAAUAUAUUAUAGGUACCG   1627 Target Full Sequence	1.5	PREDICTED: Oryza sativa Japonica Group GDSL esterase/lipase At1g28650-like (LOC107278316), mRNA	GDSL esterase/lipase At1g28650-like(LOC107278316)	coding protein	psRNATarget
AK288826.1	ncRNA:23   GGAUAUUAUAUAAUAUCCACGGC   1   |||||||*||||||||||||||* targets:4715   CCUAUAAGAUAUUAUAGGUGCCU   4737 Target Full Sequence	2.0	Oryza sativa Japonica Group cDNA, clone: J090073I23, full insert sequence	NA	coding protein	psRNATarget
AK288762.1	ncRNA:23   GGAUAUUAUAUAAUAUCCACGGC   1   |||*|||||||||||=||||||* targets:1349   CCUUUAAUAUAUUAUGGGUGCCC   1371 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA, clone: J090067F13, full insert sequence	NA	coding protein	psRNATarget